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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26168_g1_i1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		atrophin-1-like_[Bombyx_mori]
Ontology
GO:0000118 C histone deacetylase complex
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001105 F transcription coactivator activity
GO:0001106 F transcription corepressor activity
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0016605 C PML body
GO:0021549 P cerebellum development
GO:0021691 P cerebellar Purkinje cell layer maturation
GO:0021930 P cerebellar granule cell precursor proliferation
GO:0021942 P radial glia guided migration of Purkinje cell
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048755 P branching morphogenesis of a nerve
GO:0048813 P dendrite morphogenesis
Transcript
Level		FPKM:4.08 TPM:2.12
ORF EntryO_BomoMSG18556_internal:A_BomoMSG_c26168_g1_i1
Sequence
(Nucleotide)
CCTCTAAATCTAGAAAATACTAACTTTTTTGTGAAAGATAGTCACATATACAATCCTAAA
CTTGGGCATGGTATTAAAATTGAAGGTGTCCCAAATATTTTCAACCCAATGAATATAACA
AAAGAAAGTACAATAATCAGGAATTCAAAAGAGTATTCTGCAAGTATTCCTCCCTTTCCC
TATTCATCAAATCTTAGTTTTGGCAGTGATCCTGGAAAACACAATCCTCATGGCATCAAT
CCATTGAAAACTGTCATAAAATTGGAACCAAGAGATGAAACAAGTGAATTAAAGAGTCAA
AACGCCCCTGAAATTTTCACTGCTACAATATCAGCAGGAAATAAGGTTGATTCTCCAAAC
ACACCAAGATTGGATTCCTTACAAAGGATTAGTCCTTCACCATCAAATGTACATGGTGCA
TCACCACCACCCATGGAACATCCTACTGCCATAGGAAATACTGAACCCATATCACCTGCA
AACTCACAAGAAAAAGAATCAGATACCGATGATAAGCAACCAACAGACTTGAAAACTCAA
CATATATCAAAACCTGAAAATCAAAGAGACAGCTTGAGGCCACCAGCTTTTGCTCATCCA
ATAAGACCTGACAATTTGGGACTCAGAACAACTGAAGCTACCATTGTGTCTGTTGCCGGA
CAGAACATGCCTCCTCCACCTTTAAGTCAAGCTTCCATATCAGGATTATTGCACCCAGGT
CCTTTGATAACTGTAGGTAGTGGTGCAAATGTTGGTCCGTATGGATTTATGGCAACGTCT
CTCTATGGTCATCCAGGGCATCCTTCATTAGAAAAACCAGGTTCAATGCCACCTCTTATG
CAACAAATTCCGCCTTCACATGGTCATCCTAGCAGTAATTCTATACAACAACAATCTAAT
CAAAATGATCCATCTATGCCACAAGATTTGAAAATTAAACAAGAAGTACCTGACAATATA
CCTGCCAATTTATCAACACACCCTTCAGATCCGTTGCAATCTCTGAAAGAAGTCAAAGTT
CCAGGCTATCCTATAGGAAGTGCAATTGCTCAACATTTGAATACGGAACGAGATCGAGAA
TCTGTTTCTAGTGTTGAAAACAGTAGTCGACCACCAAGTCAACCGACAAATGAAAGTACA
AATATGCCCAGTGGATTCCTCGGTCCTCGAATTGAAAGTATAAAAAAGGAACCGGAATTT
TTACATCAACCCCACATTACTCCAGTATCTACCTCCCATGGACCACCTGATTCTATAAAC
ACTATAACTCCAGTAAAAAGTCCACATACACCTACACCTATCAAGAGTCAACCAAGTCAT
AATGGTACACCTCATGGCTCTCATCGATCCACAACTTCACCATTTTCGAGACATCTGACA
AGTCCATCACAACCAAGGCAAATATCTGCTTCTCCAGTTCAACCTCATACTCCAGTTTCT
CATTCTGCCTTAAACTTGATGAATCCTACGCCTATTTCGATAGCAGCAACGATACCGGGA
CCTGTTATGCACTCTGGACAACCTGGTCACCCACCTCCACATCCGTTTGCGTCACCTCTG
CATCACCCCCCTCACCCTTTGCTTCATCATCCCTCAATATTTCAACTATCTGCAGCAGCA
GCGGCACACGCTATGCATCCTTACTATCCACATCCACACCCTGGATATTCAATGCCTTAT
CCTTATCCCTACGGACCTCTGCCACAACCCCACCCGATCCCTCCTATGCACCCTGCAGTC
AGCACGGCTGGGCGTCACGATCCAGTAAAACCTTCAACAATAGAATCAACAACAATGCTT
AGTTCTCATCACAGTACCAGTTCTTCAGTAACCACAAGATCTCTCCGGGAGATATCGGAA
AGTAGTGAAGACCCGAGAAACCCGAATGCCACTACTGAAAGGCAGCTGCACGAAACGACA
ATGACCCATCATCATTCTACAAGCCACCACAGTGCAGTTCATACAAGTACAGAGAAGCAA
CCAAGTCACGCAGGAGGAGGCACTAATCATACGTTATCAATATCACATTCGACTTCGAGT
AGCTCCTCGCAGTCAATACAACATAAAATTAACACTCAACAAAAATCTGCGGGACATTCA
AGCTCACCTCACCATTTATCAGCAAGTGTTTCTCAGACCACTAGTTCATCATCAAGCGTG
AATGTCACCAACAACCATACGCACCACCACTCCCACCATCTTGCGCATCATCCGGAAAGG
CTATCTCCTGCGGACTCTATGCTGCTCCGACATCATCCTAAAATGCTACCCGGAAATCCA
AGCCATCTCATGATTCCACCACCATCAATGGGACATCCAATGGGCTTGGGGCTTCCACCA
GGGCCAGGTCCCAGTTCGATAGAAAGTTTACGATTACATGCCCAAGCTGCAGCAGGACTG
CCTCCGACTCACCAGAGATCTGGATCACCTCATCAAATGCCACACGGTCATCCTCATCTA
AGAGGTCCGCCGCGTCAGATTCCCGATGAAAACCCTGAACTCAAACTTGAGACACAATCA
CAACCGGAAGAAGAAGAAATTCCAAGTCCGGCTCACATTCCACACGGACCTAGCCCAGAG
CCAAAAATAGAAGATACCGAATGTCACAGATCACAGTCTGCTATATTCCTCAGACATTGG
AATCGCGGTGACTATAATTCTTGTGCGCGAACTGATCTTACATTCAAACCGGTACCTGAA
TCAAAACTTGCTCGAAAACGAGAGGAAAGATTGAGGAAACAAGCGGAACGTGATAGAGAA
GAAAGGGAGAAGATAGCGCAGCAAGCACATAGAAAAATAGCGACGCCGGAGAAGCCGGAC
(2820 bp)

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