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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26154_g1_i3
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		putative_homeodomain_transcription_factor_1,_partial_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0046983 F protein dimerization activity
Transcript
Level		FPKM:3.79 TPM:1.97
ORF EntryO_BomoMSG18519_complete:A_BomoMSG_c26154_g1_i3
Sequence
(Nucleotide)
TGCGAGTGCGATGTCTGATGCGATATTAATTTGATTACATCGGTGTTATGAATTCCAAAT
AAGTTTAAATTCTGTTACAGATTATTTTATTAACATTTTACGAGACATTACATTTTATTG
TTCGAAAAGTTTTCATTCGAAATTGCTGTCATGTGAATAAAATAAAGAATTCAGAATCAA
CAAATAGATTTGACCAAATGCTGGCAAACAACAAAAACAGGAACCTGGCACCAGGACTGT
ATACATAAATAATATACAATATGAAACAATTGGCAGCATGGTACCAAAAAAAAATAAGCT
CCTATGACAAAGAAGAATGGGAGACCATGGTCGAACAACTATTGATGCGAGGCACATACC
GCCGACGTATCGTAGACTTTTCATCGCACGCGCGTTCGTATCTCATAGACGTTGATTTAG
TAAGAGGATCATCGTTCCCGAAAGCGAAGCCCACCCTGGGAATGCGCCGGGTTGTTTGGT
TCGCTCTAGTCAGACTAGTGTTCCTACCCGCACTGTTCCAATGGTGGGCTCAGCAGACGT
CACCAGCTTGTGCCAAATTCCTATTAACACTATGGCTCTTACAAGTACTGAATATATCTC
TTTACCTCATGTCACCAGATAACTTGGATGTTGACCCAAATTGCTGGTTGGTGCCATTAG
GCTTAATGCTGGTGCTGAGTATGGTGCATTCACAAATAGTTAGTACGACGGAAATGGAAA
TTGCTAGAGTACGTCCCCGTTCCACTTATCGACGGAAACTGCCGCGATATTTCAGACGAC
CACGGTCAGAATGTGACGGCGGCAGTGCGGGTGGTTCCGCCGAAAGTGGTGCTACATCTA
GCCAAAGTAAGACTCCTACCACAAAACCCTCCAAATTCAGGCGCCGACAGTCCAGAAGTG
AACTAAGTGACAATGGACTCAGAAAACGCAAGAAAGAACTGCCAAAGGAAAATGTTAGCA
CACCTCTTGAACCGACCGCGAAAAATAAAGCGATAGTCAAACTTAAAGCCAAAGATTCGG
ACGACGAAGACTATATGGCTTGGAAGAAACCGGATATAAACACTCCCATAGTAACGTTCA
CCCCACCGCCGGACGATGCTACACCTAGTTCCTCCTTTAGATATAAGTCTAATATATTGA
CTAAAAAGCATTTAGAATCTTTTAATGTAAGACAAAATCAGCATAGGGCGTTATTCGCTG
ACGGTGACGACGGCTTCGAAAGCCTCAACGGTTACAACTCGAACGGGAGCGACGGAGACA
ACAGGGTAAAAATCTTACAGGCCAGACTTTCTGGTAATAAAATAGTTAGTAACGAAAGGA
ATGAGGTGACAGCAAAAGATGATTCGGCCAATGACGTTGACAAAACACCGATTGACAAAG
TTGAAGAGAACTCCACAACAACCGCCAAAGCAAACGTTTTAAAGACAGAGAACGATGAGA
AATCGAACGAACCAGACTCTGATGTTAATGTCACTGACAGTCCTAATAGAGGAAAGCGAA
TCGGTGTACGTTTCAGAAGCTCGTGGATACCAGAGAACGTGCGAAACGAATCAAGTGACG
ATGATTTTGCTAACGTTAAGAATAAGCAAAAGAAAATTGAGACTTTCCAAACGTCGTCAT
CCGATGGAGAATGTTCTGCTTCTGCGCCATCGATCGCTCTGCCATCCCACCACACTATGT
CTGACTGGGTTGGCCAAACTACTAACAGTGAGGAGAGTAGTTACTGTTCACAATCCGAAG
GGGGTAATTCTGACGTGGGCTTCCATTACGCCGCGGATAGCTCCTGGGATCCGTTCGCCT
TACTAGACCCTACAAGCGATACAGTGAAATGCACAATGTGGGAACGAGGTTCAACTCTAC
GCGCTGAGCTGTCGGCCGTCGACATTAGTTGGTACGTGGTGGCGCGCGCCGAGCGAGCCA
TGGCCGCCGAAGGCTGCGTCTGGGCGGGTCTGGCTATGGCCACCATCGTCGCGTTACTCA
CGCCCGCAATACGACTCACGCAGTTGGCCATAGATCAAGACACGAGAACAGAAGAAGAGA
CGCAATCAATGACAATTTTCTTGTACATAATATCTGTCGTCGTCAACTACAGCAAGGGCT
CTGTTTTATATATACTCTACGGAGCGTTCGGAGATAATGCTTGGGAATTGATGACGAATA
TAATATCATGCATCCTGCGTTTCGCTCTAAGCGGCCTCATGTTCTTCCTACTGGCCGTTG
CAGAACGTGCCTACAAACAGAGGTTCCTATACGCGAAACTGTTCTCTCATCTGACGTCGG
CGAGACGGGCCCGGAAATCGGAGCTGCCACACTTCAGACTCAACACGGTCAGGAACATCA
AGACTTGGCTTTCGACTCGTTCTTATTTACGGCGCCGTGGCCCTCAACGTTCTGTAGACG
TCATAGTGTCCGCTGCCTTCATGCTCACATTGATTTTGCTTGCATGCGTCAGCGCTCACT
TATTGCGGGATTCGGTGACGTTAGAAGAAGGATGGCTGTTCGAAGCGATGGTTTGGATTT
GCTGTCTCGGGATATACTTGATGCGTCTGATCACGTTGGGCAGTAACGTCAACAAAAAGT
ACCGAGGCTGTCTGTCGGCCATTCTCACAGAGCAGATCAACTTGCATCTAGCCATAGAAC
AGCGACCGGAGAGCAAAGACCAATTGACTGTGGCCAATAACGTACTCAAATTAGCCGCCG
ATCTGCTGAAGGAACTAGACGCGCCTTTCAAGATATCCGGTATATGTGCTAATCATTATT
TGTACACCGTATCGAAAGTTGTGATATTGTCCGCCCTGTCGGGTGTTCTATCCGAGATGC
TGGGTTTCAAATTGAAATTACACAAAATCAAAATCAAATAGACGCTTAGAATAGATCTCT
TTTGTAGCTTACAAATATGTATGTTTATTACTTACGTTCGTAAAATAAGTTATCTTATTT
TGTTGCCATACGTAAAAAATAATACGCCAGACCATATTATTTTTATAATTCATAATAATA
ATTATGAGAGGACAGACTTATGTTAAATGAGCGTTTACGAAATTAAATAAGGCATTAAGA
AGTCAATATAGAGTAACTAAAATAGCAAGTCGAACTAGAAACTAACCATTTGTTTTTATC
GCGATGACCTTGGTCTATTGTTACGCCAAACTAATAAAATTGATACATTGTCATCGTTTC
TTGATAACGAGTAAAGATTTCTATGTTAATAGCCCGT
(3217 bp)

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