SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26127_g1_i3
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		TAF5-like_RNA_polymerase_II_p300/CBP-associated_factor-associated_factor_65_kDa_subunit_5L_[Bombyx_mori]
Ontology
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0030914 C SAGA complex
GO:0033276 C transcription factor TFTC complex
GO:0043966 P histone H3 acetylation
Transcript
Level		FPKM:6.21 TPM:3.23
ORF EntryO_BomoMSG18422_complete:A_BomoMSG_c26127_g1_i3
Sequence
(Nucleotide)
GTGTCCCTACTATATAGGTCTATGGAGTGGTATTGTTTATTGTTTACAAATTTTACAATT
TGTACCTACCTTGAAAACGTAAAAACACTACAAATCCAGGAATTTAACTAATAAGTATTG
GCCGTGTAAAACGGTAGATTGTAATATATTATGTCCACCAAAGAGTATTAATTCAGTTCA
GTGCTCAGATAAAATGAATGTGTGATAAAATCAAACAAGTGAGACATCGCAAAACATTCT
GTTTTATTTTATTAAAAGTATTCAATGATAATGTCATTAATAAAGAAGACAAGAAACGAT
GCAATTAAAGCTGCGGTGGCTTCTTATCTAGAAAGGCGAAACTATCCCGATACTGAATAT
TACGGTAACAATAACCCAAATTGCCAGAGTGCTGAGCAAATGGCAGTTTCCACTATTGTA
CAGTCTGAAGCAAGTCGTGCAAATTCTATCTTGTTTTCATGTATCAACAATGATTCCTCT
CAATACGATATACAATACACCAGGTTAGTCAACTTTATAAAAGAAATAAGAATCGAGAAA
CTAAAAAATGAGCTTCTGGGATTGTTGAGCCCTTTGCTATGTCATCTTTATCTAGAGATG
CTACGTGGGGAACACGGAGGTGCTGCACAAGTGTTTTTGAAACGACATTCAGCAACATTA
CCACAGAAAGATTTATCTTTCCATCAACCAATTGATGGGAATTTACCCTCTGCATTGTAT
AGGCCAAATAGTCTAGAGCAACTGTTTAATTCACTTCAAAATGGTACAATAGATAATGAA
ACCCCCGAAAAAGATTACATGAATCAAATACTTGATGATATTGGATCCATCTACACTTTA
CAGGACATTGAAACTAGACCATCCATTGCTGCATTCAGGTCATGTAAATATGATATTTAC
TTATCACAAGATGCTTTAAATATGTTGAAAGCATATTTAGCCAAACATGGACATGTATTA
TTAATACAAGTATTGCAAACATGGTTTCATATTGATATAAATAGTGATAATAATAAAAAA
AATTCTGAAGACGAAGAAGAAATGGAGTCTGATATGACAGTTAATAGAAATTTTTCTGAA
GAACGAGTCATAGAAGCAAACGACCTGTTTTCTAAATGTAATGGCCATGCTGAATATCAA
ACTGTTGATAAGGAGTTGCGTGATCTCCAAGATGCAATCAAAGGAGTTAGAGACTCAACG
GCTCCATTAAAATTGTACAAAATATCAGCACCGGATACGCATTTAATATGTGCAAAAACA
GATCCTAGCTGTAACATGCTGTGCGGTGGCTTCATTAATTCTGAAGTCAGAATCTGGGAT
CTTGGCCAAAACAATATGCAAAAAAGGATCAATCATAACATATCAAAAATTGAATTAGCT
TGCAACATGCCACCAGAATCTTCAAACGATCATGATACATTACAAATTGGCGCCGGATTG
CCCCTGAGAGGCCACTCAGGCCCAGTACAAGCTGTGACTATTATGCCCAGAGAAGAATTA
ATACTCTCAGCATCACACGATAACACAATGAGAGCTTGGAGACTGTCTGATTATTCATGT
GCTGCAATTTACAGAGGACACAATTATCCTATATGGTGTATGGACATATCAAGAAGTGGC
CTATTTATAGTAACGGGATCTCATGACAGAACAGCTAAGCTTTGGTCTTTGAATAGAACG
TTCCCAGTGAGAGTGTTTGTCGGTCACATGTCTGATGTCACTTGTGTGAAGTTCCACCCG
AACGAGTGTTACATAGCGTCTGGCGGCGCGGACCGCAGCGTGCGGCTGTGGAGCGTGTGC
GACGGCCGGCTCGCACGCGTCCTGTGCGCACACCGCGCGCCGGTGCGGGCGCTCGCCTTC
GCACCCAGCGGAGCCTACCTAGCCACTGCCGGAGACGATAAAAAAATTAAAGTGTGGGAC
TTAGCAGCAGGAACTTGCGTGCAAGAGTACAAAGGACACCATGGTAAAATAATGTCACTG
GATTGGTCTTCGGTCGGAAAACCCAGCCTAACTAACAGAGTAATGGCAGAACCTAATGAA
TTATCAACGGAAAACTCTCTACTCTGTTCAGCAGGAATGGATGGAATTGTGAAAGTTTTT
CATGATTGTCAGACTAAAAATAAGCCAACCTCGAGTCAAGATATTTTAACATCAACTTAT
AATACGAAATGCACCTATTTGGTGGATGTACAAGTGCATCCGGAATGGGTTGTTGCGATT
GGAACCAAGCAATGATGGACTTTTAATGATTATGTAATTAATAAAATGTAAGACTATTGT
TAAAAAAAAAA
(2291 bp)

- SilkBase 1999-2023 -