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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26116_g1_i1
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		cell_cycle_checkpoint_control_protein_RAD9A_[Bombyx_mori]
Ontology
GO:0000075 P cell cycle checkpoint signaling
GO:0000076 P DNA replication checkpoint signaling
GO:0000077 P DNA damage checkpoint signaling
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008408 F 3'-5' exonuclease activity
GO:0008853 F exodeoxyribonuclease III activity
GO:0016787 F hydrolase activity
GO:0017124 F SH3 domain binding
GO:0019899 F enzyme binding
GO:0019901 F protein kinase binding
GO:0030896 C checkpoint clamp complex
GO:0031573 P mitotic intra-S DNA damage checkpoint signaling
GO:0042826 F histone deacetylase binding
GO:0071479 P cellular response to ionizing radiation
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:1901796 P regulation of signal transduction by p53 class mediator
GO:1902231 P positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage
Transcript
Level		FPKM:8.79 TPM:4.57
ORF EntryO_BomoMSG18364_3prime_partial:A_BomoMSG_c26116_g1_i1
Sequence
(Nucleotide)
CCTAATAATACCTGGTATCTCAGTAGGTCAGGATCAGGAAATTAGACAAAAAATTATAGT
GAAAACATAGGTAATCCTTATATTGATGTTAAAGCCTAGAAATGAATTTAAAGTAGATTT
TAGTTAACTTTCTGAGGAAGTCAACATAACAATGAAGTGTCACGTTCCGGGGCCTAATGT
TAAAGTTTTAGCAAGAACAGTACATACCTTAGCTCGATTTGGAGATGAATTATACCTGGA
GTCATTACCCGACTGTATATTATTGAGAACATTGAATGCAGCCGAATCCGCATATGCGAT
GATTAAATTTAACAAAAACTTCTTTTCTTATTTTAATTACAATTATTACTCGACTGAAGA
TAACGAAGGTCTGAAATGCAAAATATCGATGAAGTCTGCTTTAAACGCCTTTAAATCTCC
AGCTCACATTGATAAACAGGTAGAAAGTTTGGAAATGAAATTAGATCCAGAATCTTGCAA
GTTAATATTTTGTTTGAAATGCAAGCATGGTATAGTTAAGACACATTTTGTATCAATATT
AGACTGTAAAGCGATGCAGGCTGTGTACACTAAAGATACAGTACCAAACAGAATTACTTC
ACCTCAAAGAATACTAAACGAAACACTGAACAGCTTCCAAACCTCTGACGACCAAGTGAC
ATTAGAGGCCACAACTAAGTCACTGGTAATAAAAAATTATATTGATAGTAATATGGATCT
GACAAAAATAATTCGAACACATGTAAGCTTAGATCCTGCTGAATTTGACAACTACATCAT
AGGAGAGGAAACCACTATAACATTTACATTAAAAGAGTTCAGAGCCCTACTTGCGTTTGC
TGAAGCATTAAATTTGCCGTTGCAACTTCATTTTGAGACTACAGGTCGTCCAGCTGTATT
CATAGTCCATAATGGAACTACTTTTGAAGCACATTTTGTGTTAGCAACATCTAAACCAGA
CAATGCAACACAAGCAACATCAACACAGAGCACTACCACAAAGGAAAGGAATAAAAGAAA
AGATACATGTAATACTCAAGGCTCAGTAAAAAAGAAACGGCATATAGATGTTGAATTTTC
TAAGTGCTTAGAAGAGGACTCTCATCTATTTAATTTTGTTGATATCCCTGATGATATAAA
TCTTAAAGCTAGTAATAATTTAGATAATGTTAAAGAACAAATAGACTTTGATAATGTTAT
TCCAGCATCTCCAACTTCAAGG
(1222 bp)

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