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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26104_g1_i2
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		apoptosis_regulatory_protein_Siva_isoform_X1_[Bombyx_mori]
Ontology
GO:0001618 F virus receptor activity
GO:0005164 F tumor necrosis factor receptor binding
GO:0005175 F CD27 receptor binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006915 P apoptotic process
GO:0006924 P activation-induced cell death of T cells
GO:0008270 F zinc ion binding
GO:0032088 P negative regulation of NF-kappaB transcription factor activity
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0097191 P extrinsic apoptotic signaling pathway
GO:1901030 P positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway
Transcript
Level		FPKM:7.79 TPM:4.05
ORF EntryO_BomoMSG18328_complete:A_BomoMSG_c26104_g1_i2
Sequence
(Nucleotide)
AGATTATACACTTAATATATTTGGTCCTGTTTTTATTTGATGATTGATTGTTACCTGTTA
TGCAGTTATTGCACAGTTATTGCAATAAGATTAATAAAAACGTACATTCATCGCTACAAT
ACGGTATCATACACATCAAGTCTATTATGCAGAGTTATTTGAATAAAAAGTTATGAGTGT
ATCTAGTGATCTTAACATGTCAAGCTATCAACTATAAATAATTTCGTCAACATGACAAAA
CGAACGAACCCTTTTATCGATGATTTTCTTCCGCAAAGTAAAATTCATGTTAGTTTAAAA
AAGTACGATAAACACAGCACAGACAATGAAAAACGACTGAAGAAAGTTTATGAAAAAACC
CTACAAATGTTATTTAATGGCGCCAAAAAGGGTACAACTACTGAAACCAACAACAACTTG
CAGGATAGTAAAGTGAGAAAAGACAAAAAAAAACAATTATTTATCGGCAAAGATGGCAAT
CTACTACATTCTGGTTGTCTGATAGAGACCCAATCAATAAGAAAAAACTGTCATTGCGGT
GTTACATCAGAGACCAAGTGTGCATATTGTGAATTTGTACTATGTGATTCATGTCTCCAC
ACCTGCGCTGGTTGTGAGCAGGTTTACTGTAACAAATGCTTGTTTGTAGGGTCAGAAGGT
TCTGAAATCTGTGTATCCTGTTATAGTTAAAATATCTTTATAGAACTATAGGAGAGACTT
ACCTTTATAATATATTAATGAACAGACATGTTGTTATTGTATTAAATAATTTAATAATAA
AAAAATTAAAGTTACTTAATAGAACCATGTTTATGTGTCAAAATAAAATTGCAAGAAAAA
AACAAACCAGAAACATTATTTATTAATGACCCTGGACCTTAGTACGGATTAGGGTTGGAC
TGAAATGAATAGTATTTTTAGATAAATAATTGGTTTAATCCGCAAAGTAATATCAGTTGC
TCGTGTTGGAGGGTTGACTGTTATGTCTGGTTGTGCTGAATGTGTACGAGCAGACTGACG
GGCCGAACGCTGGCAGCCTATTTTGTAAGCTAAATTTTAGATGTCCAACGCTGAAAGCTG
CGCTCGTCTTGTTTTTGATCTCGAACTTAATTAATTTTATTTATTTTTATCTTGTTGTGT
ACAGCAGCTAGTATACACACATATTAAACAACTAATATCGCATTTAGATGTTTAAAAAAA
ATATGAAACGTTTATTATTTCGAAGAATAAAGATTGTTTTGTGCACAGTCGTATGGCATC
ATACGTATTCAACTTGTTTATGTTTCAGTAACAAAAATAATGTTTATTAAATTTACCGAC
GTAGTCGGAGTAATATTACTCATGTGTATAATATTTAGCCGACGCACATCTGTTAATTGA
AATGCATATAATAATATGTATATAATAAAAAATATTATTTTTTACTTCTTTAACATTGTT
TTTATTTTGTGAATCGTCGCTTCGAT
(1466 bp)

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