SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26104_g1_i1
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		apoptosis_regulatory_protein_Siva_isoform_X1_[Bombyx_mori]
Ontology
GO:0001618 F virus receptor activity
GO:0005164 F tumor necrosis factor receptor binding
GO:0005175 F CD27 receptor binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006915 P apoptotic process
GO:0006924 P activation-induced cell death of T cells
GO:0008270 F zinc ion binding
GO:0032088 P negative regulation of NF-kappaB transcription factor activity
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0097191 P extrinsic apoptotic signaling pathway
GO:1901030 P positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway
Transcript
Level		FPKM:14.21 TPM:7.39
ORF EntryO_BomoMSG18327_complete:A_BomoMSG_c26104_g1_i1
Sequence
(Nucleotide)
AGATTATACACTTAATATATTTGGTCCTGTTTTTATTTGATGATTGATTGTTACCTGTTA
TGCAGTTATTGCACAGTTATTGCAATAAGATTAATAAAAACGTACATTCATCGCTACAAT
ACGGTATCATACACATCAAGTCTATTATGCAGAGTTATTTGAATAAAAAGTTATGAGTGT
ATCTAGTGATCTTAACATGTCAAGCTATCAACTATAAATAATTTCGTCAACATGACAAAA
CGAACGAACCCTTTTATCGATGATTTTCTTCCGCAAAGTAAAATTCATGTTAGTTTAAAA
AAGTACGATAAACACAGCACAGACAATGAAAAACGACTGAAGAAAGTTTATGAAAAAACC
CTACAAATGTTATTTAATGGCGCCAAAAAGGGTACAACTACTGAAACCAACAACAACTTG
CAGGATAGTAAAGTGAGAAAAGACAAAAAAAAACAATTATTTATCGGCAAAGATGGCAAT
CTACTACATTCTGGTTGTCTGATAGAGACCCAATCAATAAGAAAAAACTGTCATTGCGGT
GTTACATCAGAGACCAAGTGTGCATATTGTGAATTTGTACTATGTGATTCATGTCTCCAC
ACCTGCGCTGGTTGTGAGCAGGTTTACTGTAACAAATGCTTGTTTGTAGGGTAAGATATA
TTATTAGAATATATATTATAGG
(682 bp)

- SilkBase 1999-2023 -