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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26075_g1_i3
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		RNA_polymerase_II_subunit_A_C-terminal_domain_phosphatase_isoform_X1_[Bombyx_mori]
Ontology
GO:0000922 C spindle pole
GO:0004721 F phosphoprotein phosphatase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006366 P transcription by RNA polymerase II
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0006470 P protein dephosphorylation
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008420 F RNA polymerase II CTD heptapeptide repeat phosphatase activity
GO:0010458 P exit from mitosis
GO:0015629 C actin cytoskeleton
GO:0016591 C RNA polymerase II, holoenzyme
GO:0016787 F hydrolase activity
GO:0030496 C midbody
GO:0050434 P positive regulation of viral transcription
GO:0051233 C spindle midzone
GO:0051301 P cell division
GO:0061052 P negative regulation of cell growth involved in cardiac muscle cell development
GO:0070940 P dephosphorylation of RNA polymerase II C-terminal domain
Transcript
Level		FPKM:8.82 TPM:4.59
ORF EntryO_BomoMSG18215_3prime_partial:A_BomoMSG_c26075_g1_i3
Sequence
(Nucleotide)
GGCCGACAAAACTATACCTATTTTTGTTCCATCAGAAAAGCCTGTGAAACTCGCAAAGTG
GAAAATAAAACAAGGTACTGTGGTAACACAAGGCCAAGTATTATTTTTATACAAAGATTT
AGCGGGCGATGGTGAAGAGTTAAAGAAATTTAAATCATCACACGCTGGTACTGTGTCATC
GATCAAGGTGAAAGAAGGAGACGTAGTAGAACCTAGTTCGGCTGTAGCAGATTTGGAAGA
ATGCCGCCATCCAACAGTGATGATGGAGATGTGCGCGGAGTGTGGAGCAGACCTCCGCAG
CGAGGAGACCAAGAAGCTGGACGTGGCCATTGTACCAATGGTACACTCTGTACCTGAATT
AAAAGTGTCTGAAGAACTGGCACAAAAACTAGGTAAAGAGGATGCTGAGCGTCTTCTGAA
AGACAGGAAATTAGTACTTCTGGTAGATTTAGATCAAACATTAGTTCACACTACTAATGA
CAATATACCACCCAATCTAAAGGGAGTATTACACTTCTTCCTAAGAGGACCTGGAGGGCC
AGGGCGTTGGTGTCATACGAGGCTTCGACCACGCACTCAAGAGTTTCTTGAATCAGCAGC
AAAGAACTATGAACTTCACATATGTACATTTGGAGCCAGGCAATATGCACATGCCGTAGC
TGAGCTCCTAGATCCGGAAAAGAAATATTTCTCACATAGGATACTATCCAGAGATGAATG
CTTTGATCCTAGAACTAAAGCAGCCAATCTGAAAGCACTGTTTCCTTGTGGTGACAACAT
GGTTTGCATTATTGACGATCGGGAAGATGTGTGGAGACATGCTGCTAATCTAATTCATGT
CAGGCCTTACTCATTTTTTCAATCGACCGGCGATATCAATGCACCGCCACCAATTGAAGA
GAAACCAAAATTGACGATCGGCAAAAATGGTACTCAACCACAAGTACAAGAAATGCCGAC
TTTAGATGCAGAACCAGATGAAAATCTAGAAAAACCTGCTAACAACTTTGAAAAACCTAC
TGAAGGTAGCAACGGAAAAGTCATAAAAGAAGTAATGGAAGAGAAGCCAGTTGATATTAA
GGAAGGCAATGAAAAAATTGAGGAAGTTGAATTACCGCCAGCTGAGCCAGTATGGACAGA
GACATCTGATGGACAGATAGAGGTGGAAGATCCTGATGATTATCTTATCTATTTGGAGGA
TATTTTGAAGAGGATACATAAGCATTTTTATGATGTCTATGACAAAATGGGTCAGAAACA
GATACCAGACCTTAAAATAGTAATACCTGAAGTTAAAAGTGAAGTGTTGACTGGAACTAG
TTTAGTGTTTAGTGGTTTAGTGCCTACACATCAGAAACTGGAAACTTCTAGAGCCTATCT
TGTGGCGAGAAGTCTTGGTGCTGAGGTGACACAGGATTTTACTGATAAAACAACTCATTT
AGTAGCTGTTAGAGCAGGCACGGCAAAAGTAAACACAAGTAGGCGAATGACTGAGAAGAA
ATCCAGCAAATTACATGTTGTTACACCAGATTGGCTGTGGTCATGTGCGGAACGATGGGA
ACGAGTGGAAGAGAAATTATATACATTACAAAGAGGTGGAC
(1601 bp)

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