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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26066_g1_i4
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		collagen_type_IV_alpha-3-binding_protein_isoform_X1_[Bombyx_mori]
Ontology
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0035621 P ER to Golgi ceramide transport
GO:0070273 F phosphatidylinositol-4-phosphate binding
Transcript
Level		FPKM:4.50 TPM:2.34
ORF EntryO_BomoMSG18189_complete:A_BomoMSG_c26066_g1_i4
Sequence
(Nucleotide)
GTTCCTCAGCTAATGTCAAAAAAAACGGCAACAAGCAACAAATCGTTGTAAAAACGGAAT
TATATCAGATAAAAGTTTGGTTTTTCATTGTTTGGTGTCATTTTGTTTAAAGTTGATTTA
ATGTTAACACTTCCATACACGTAACACAATATGATTGACGAAAACATCACAGTCAGCGAT
AGTTCTGATTTAGAAGAGGGCGGAACTCCTGAACTTCGCGGATACCTAAGCAAATGGACA
AACTATATACACGGCTGGCAGGATAGATTTATTGTCCTTAAGGATTCTACTTTATCTTAT
TACAAGAATGAACTCGAAAGCAATTTAGGATGCCGCGGTGCCTTATGTCTGAAAAAAGCT
AAAGTCAAGCCTCACGAGTTTGATGACTGTAGATTCGATGTTTCTGTTAGCGACTGCGTT
TGGTACTTAAGAGCGTCTAATCCAGAGGAGAAACAGCAATGGATTGATATTCTAGAGTCT
TTCAAACCACTGAAGGCAGATGAGCGGGCTGTTCAATTGACAGTGAACTGTCACCGTCGC
CCGTGGACATCTCCAACGCCAGAGGTTGAATCAGGGTACGGTACAAGTTCAGATAGTAGC
TCAAATGGAGGAGGTCTTCAAAGGCATGGTTCTGCCACTTCACTACAGTCTACAGGGTCA
CACGGTCACTCTACACGTCGCCTCACAGAGAAAATCACTGAGCTGGAAACGTACAATGAG
CTTCTGTCAAAGCAAGCAATACAACTGCAACAATACTTTGATATGTGTATCGATTCTTAC
CCAAAAATTGATGATGCTAATGATGCGATAGATGCTGTTAAATTAGCCGATGGCAACGAT
CTCAGAGTGCACGCAGGCGAAGTGCGGGCGACGAGTACGTCGTTCCGAGCGACGTGCGGC
GCGACGGTGGCGACGCTGCAGCACTGCGTCGAACTGTTGCGTCGACGCGAGAAGCAGGCG
AGACAAGCCGAGGACTTATATATGGCTCTCAAGACTCAACTAAATGAAGCGAGATTAGCA
TCCAAACCCGGACCAGACCACGAGGAGGGTCCACACTCCACCCTCCCCGACGACGAGTTC
CACGATGCGATCGAGACAGGCTTCGACAAAATGGAGGAGGAGCGGTGCACAAGGGTGGTG
CCGACCGTACACACCCGCGACCAGATTGAATTGCCACCGCCGGCCATCGATAACCGTCTC
ACCGTACATCCCCTGTGGCCGGAGATTGACAGGATATCGACAGAACAAATACAGGCCGCG
TTCGAAGGTGTCGGCGGTGAAATCGGGTGGCAGTTGTTTGCTGAAGAGGGGGACATGAGG
ATGTACAGAAGGGAAGTGGAAGTCGACGGCATGGTGATGGATCCTCTGAAGGCGATGCAC
AAGGTGCGTGGCGTCTCTGCGCGTGAAATGTGTCATTACTTCTTCAACCCGAGATACAGA
TATGAATGGGAAACTACCCTAGAACAGATGACGATAGTAGAAGAGATCTCATCAGATGCG
CTGGTGTTCCACCAAACGTTCAAGCGGATCTGGCCGGCGTCGCAGCGGGACGCACTGTTC
TGGTCACACGTGAGGGCCTCCAGCGAAAACACCTTCGCTGTAACCAACCATTCCACTACC
AACACGGAATACCCAGCGAACTCTAGTGCGTGCATCCGTTTGTTCGTGACCGTGTGTCTG
GCTTGCCGCAGCACGTACCCGGCCGGCGAGCAGCCCACGCGGGATAATATCACCACGAGC
ATCGCCTATTGCAGTACAGTGAACCCTGGAGGTTGGGCACCGGCCGGCGTGCTCCGTGCC
GTGTACAAACGTGAATATCCCAAGTTCCTGAAGCGTTTCACCGGCTACGTCGTCGACCAG
TGCAAGGACAAACCTCTCGCCATCTAGCGGCGCGATAACTCAACTGTTGACGCGCGCGCC
CGCACGCTATGCGAGTTCACGTTATTTATTCTTATGTTTTAGTGTTATCGTTATATAACG
TCGATGTTGCGTGATAAGAAGGTATCGTCATAAAAATTCAAATCAGCCGAAATAATGAAC
GTTGATAAACCAGTTATTCTAAATACAGATTATCAACTCTAATATGTTCGCTGTATATAT
AAATTTATATCAATCAATTACTGCTGATAGGACTTCTTGAGTCCGCGCGGGGATAGGCAC
CACCGCCCCGCCTATTTCTGCC
(2182 bp)

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