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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c26033_g1_i3
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		DNA_polymerase_alpha_catalytic_subunit_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000731 P DNA synthesis involved in DNA repair
GO:0000785 C chromatin
GO:0001882 F nucleoside binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003896 F DNA primase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005654 C nucleoplasm
GO:0005658 C alpha DNA polymerase:primase complex
GO:0005730 C nucleolus
GO:0006260 P DNA replication
GO:0006269 P DNA replication, synthesis of RNA primer
GO:0006270 P DNA replication initiation
GO:0006271 P DNA strand elongation involved in DNA replication
GO:0006272 P leading strand elongation
GO:0006273 P lagging strand elongation
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0008283 P cell population proliferation
GO:0008408 F 3'-5' exonuclease activity
GO:0016363 C nuclear matrix
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:4.16 TPM:2.16
ORF EntryO_BomoMSG18076_3prime_partial:A_BomoMSG_c26033_g1_i3
Sequence
(Nucleotide)
CGCCAAAATATCTAAAAAGAATTTAACCTAATCAAAATATTAGTGTTTCTTGTAAATGTA
AATTGTTTTAAACTTATATATGTGTACAAAAGAAAAGCTATTAAAAGAGAATGGCCGATT
CAATAGCTGCTCAGCGTGCGAAGCGACAAAAAACAGACCGACACGGTCGATTCTCGGCGT
TTGAGAAGCTAAAACAATTAAAAGGGAAAGGTGTAAAGCATAAGTACGATGTGGATGTGC
TTGAGAATGTGTACGACACTGTTGACGAGAAAGAATACACAGAAAGAGTTCTACAGCGAC
AAGAAGACGATTGGATAGAAGATGATGGTACTGGCTATGTTGAAGATGGAAGGGAGATAT
TTGATGATGATGATGATGCTTATGAAGCAACAAATAGTAAAGATACAGGCAGAGGACAGA
AAAGGAAGGCCAAAGTTGCAGCACAGTCCTCAGGAAAAGGGAATATACGAAACTTAATTG
GTAACATGCCTAGTAAGAAAAAAGAGGATGTAAAGATTTCAGAAGATAATATTTTATCTG
ATATTATATCTGATTTGGATGCTAACACTGCATCAAATGTAGTAAAATCTACACTGCCTA
TAACTAAAACTAACATTGTGGATACAAGTAAGAGAGATGCACAAAACTACTTCAAAAGTC
TTTCTGCTAACGTCAAGAAACCTTCTGTACTAAAAACATTCAAGGAAGAAAAGGAGACTG
AAAGTATTGAGCCAGACACATCTGCAGTACAGTGTGAAAAAAATATGGTAAATATGATAA
ATCATGTGGTAAATGAACCTGCAAATAAGAAAATCAAGAAACCAGAATGGAACATTGAAA
AAGAAATCAAGCAAGAACTTAATGAAACGCTTACTCCTAATATAGAAGAATTTGAAACAC
AAGATATTGACTTTGACGATGACTTCAGCAATGATGCAAAAACGTCCCAAGTGAAAAACG
AGCCTGTCAGCACCGGAACTATCACCGAAAATCCTACAACAGACATCACTGATGAATTTT
TCAATGACGAATTTGAAATATTCCCTTTACCAAAGAAAGAAACTACGAAAGAACTGAAAC
CATTGACTAGTACATGGCCAGAACAAGGAGGTGACAACCAAACTGTGTCTTCAGTTCAAA
GTGATGGTCAATTACCACTGCAAACCAATGAAACAGGGGAGAAAGTGCTTAGATTTTACT
GGCTTGATGCATGGGAAGATCGGTTTGTAAAACCAGGCGTTATATACCTATTTGGAAAAG
TTTATGTTGACCCATCAAAAAAGAAGGCTGGATGTGTATCATGCTGCCTTGTTGTGAAGA
ATGTTAATAGGCAGATATTCCTGTTGCCAAGAGAATATAAACTTGACCCAATAACCCTTG
AGCCAACAGAACAAGAGGTGACGATGATGGATATGTATGAAGAGTTCAATAGTTCTGTGG
CAAGTGAACTCAGTCTCCAAGAATTTAAATCACGAAAGGTCACCAAGAACTACTGTTTCA
ATTTGCCAGATATACCAGCTCAATCTGATTATTTAGAAGTTAGATACTCGGCAACTCTCC
CTCCGCCTCCTACCAACAAAAAATATTTGACATTCTCACATATATTCGGAACGAACACAT
CTTCACTAGAAATATTCCTACTAGAGAGGAAAATCAAAGGGCCCTGTTGGCTTGAGATCA
AGAACCCGGAAAGCGTCCAAGCCAAAGTGTCTTGGTGTAAATTGGAAGCCTCGTGTGAGA
AGATGGAACATGTTAATGTTGTCCGAACGGACGGTGACTTAGAACCACCTCCGATAGTCA
CAGCTGCTATAAACATGCGCACAACTATGGATCCGAAAACGCGAAAAACAAAGATTGTGA
TGTTGAGTTGCTTGACTCACAGCAGTTTCCCGATACACAAGTCGCCTCCGAATCCACCGT
TTCAGCAGCATTTTAGCATAATAACAAAATGTAACGAAATATGGCCATTGGATCTAAAAC
AGGCTCTACCGCAATATAAAGCGACGAAATTAACCAAATGCGATACAGAGAGAGAACTCC
TCAATTATTTCATGGTGCAGTTTTGGAAACTTGACCCGGACTTGGTGGTCGGTCACGACC
TGCAAGGTTTCCAACAGGACCTGCTCATAGGGAACGTACTGGACCTCAACATACCGAACT
GGTCGCGGCTGGGCCGTCTGAAGAGATCTGTCGCTCCGCAGAGGAAATTCGCAGCGAAAG
ACGCGTTCTTGGGCCGTTTAGTTTGCGATGTAAAGATATCCGCAATGGAACTTATCAGGG
CCCGGAGTTTCGATCTCGAAACCCTTTGCACTAATGTATTGAAAATGAAAGAGGGCGAGC
GTATCGATGTGGCACTCGAGGATTTACCGAAGTACTATGAAAACAGTAGGGATTTATTCC
AGCTCGTGTCGCTCAGTATGCAGGACGCGTCGTACGTGCTGAGGATAATGTGCGAGCTCA
ACGCTATACCTCTGGCTCTTCAGATCACGCAGATAGCGGGCAACGTCATGTCTCGAACCC
TACTCGGCGGCAGATCTGAACGCAACGAGTTCTTATTGCTCCACGCCTTCACTGAGAAAA
ATTATATAGTACCTGATAAGATTTATGGCAAGAAGACAACTGCTGAAGACGGAATTCAAG
AAGACCAAGAAGAAGGTGCAAACGCTCCCAAGAAACAAGGAAAGAAAAAGGCGGCCTATT
CCGGAGGTCTGGT
(2713 bp)

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