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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25984_g4_i3
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:6.56 TPM:3.41
ORF EntryO_BomoMSG17923_3prime_partial:A_BomoMSG_c25984_g4_i3
Sequence
(Nucleotide)
GAAATATTGGTTTCGACGTTGGTGAATGGCTTGGAACACTCATGCTGGCGGGTTTACCGG
ATAATTACAAACCTATGATCATGGGTCTGGAAAGTTCCGGCATTATCATTTCATCAGATT
TTATAAAAACAAAACTTTTGCAGGAAGTGAAAGTTTCTGAGTTTACTGCATTCTTTACGA
AGCACAGAAATACCTCTAACAATAATTCAAAGCCAAAAGGAAAAGGCCTCTGATGTTATA
ACTGTGACAAATATGGACATTTTAAAAATCAGTGTACAGTGAAGAAATCTAATAATCATA
ACGGTTTTTCAGCAGTTTTTTCAGCGTACACCACCCTATATCAGGACGAGTGGTTTATAG
ATTCAGGCTCTACCATGCACATGACAAGATATCCTGAATGGATGTATGATTTACGACCAC
CTCTGATAAAAAAAATAATAGTGGCAAACAGTGACTCTGTCTCCGTGCAAAGTATGGGTA
ATATAAACATTCAAACCAATCTATGCAAGGAAAACTGTCCTATCCAGATTATAAATGTTT
TATTTATTCCTGAGCTGAGTACAAACCTCTTATCGATCAGTCAGTTGACATAAAATGGCT
GTAAAGTAGAATTCACTGATATGGGGTGTAACATATACAATACCAACAAGGTCCTCATAG
CAACTGCCCAACTACCAATAACATGTACAAACTCAATACTGTTAAAGGCAGTGCTTATGC
TGTTTCATGTGAAAGTAGGACAGATATTGTTACATGGCATAAGAGAATGGCACACTTGAA
TATAGCTGATGTGAAGAGGTTGGAGGTATGTGCAGATGGTATTACTATAACAAATAAAGA
AATTGATGCAGTTTGTAAATCATGTTGTGAAGGAAAACAAACACGACTACTGTTTCCTCA
ATCTGGTTCGAGAGCAAGTACTTTACTAGAAATAATACATACTGATCTATGTGGTCCGAT
GGAGACACCATCAGTTGGTGGTGCAAGGTACTTTGTAACCTTTATAGATGATTATTCTCG
CAAAGTATATGTGTACTTTCTAAAGAACAAAATGGATATTAAATCTGTGTTTGCACGATT
TAAAAGTGAGGTGGAAAATGAGTTGGAAATGAAAATCAAAATGTTAAGAAGTGACAATGG
AAAAGAATATTGTAATAAAGATTTATCTGATTTTCTAGCAGCTTCCGGCATCAAGCACCA
GACCAGCGCTCCCTACACGCCTGAACAAAATGGACTTTCTGAAAAAATGAACCGTAGTCT
GGTGGAGCGAGCAAAATGCATGCTGTTTGAGGCAAAACTGCAGAAAATATATTGGGCCGA
AGCAGTAGCTACTGCTGCTTATATCATTAATAGATCTCCATCACGAGTTCTGGCTGAGGT
AACACCTTATGAAAAATGGACTAGTAAGAAACCAAACATTTCACACTTAAGGATTTTTGG
CTCTAAGGCCATGGTACATGTTCCGAAGCAAAATCGTTTGAAATGGGATCGTAAATCACA
AGAATTGGTTTTCGTAGGTTACTGTGAGAACACAAAGGGGTACAGATTAATTGATCCTAA
TAGTAAGAAGGC
(1572 bp)

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