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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25975_g1_i1
Scaffold_idBomo_Scaf018
NCBI non-redundant
(nr)		pre-mRNA-splicing_factor_ATP-dependent_RNA_helicase_PRP16_isoform_X1_[Helicoverpa_armigera]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
Transcript
Level		FPKM:3.38 TPM:1.76
ORF EntryO_BomoMSG17888_5prime_partial:A_BomoMSG_c25975_g1_i1
Sequence
(Nucleotide)
CGGACCTGGACAACTACTCCGCCATCATCATGGACGAGGCTCACGAGCGCTCACTGTCCA
CCGACATGCTCTTCGGGCTGCTGCGGGAGGTGGTAGCTCGTCGCTCCGACCTGAAGTTGA
TCGTCACGTCAGCCACGATGGATTCGACTAAGTTTTCGACGTTTTTCGGTAACGTGCCGA
CTTTCACCATCCCCGGCAGGACCTTCCCCGTGGAGACGTTCTTCTCGAAGAACCCGTGCG
AGGATTACGTTGACGGAGCTGTCAAACAGGCTTTACAAATTCATCTGCAGCCAGACGAGG
GCGACATTCTGATATTCATGCCTGGTCAGGAAGACATCGAAGTTACGTGCGAGGTATTAA
CAGAAAGACTGGGCGATTTAGACAACGCGCCCCCCCTGACCGTCCTGCCGATATACTCTC
AGCTCCCCGCTGACTTGCAGGCGAAGATATTCCAGCGAGCGCCGCCCGGACAGAGGAAGT
GTATCGTCGCCACCAATATAGCAGAAACGTCACTAACCGTGGACGGGATCATGTACGTCA
TAGACTGCGGATATTGTAAGCTGAAGGTTTACAACCCGAGGATCGGTATGGACGCTTTGC
AGATATATCCGGTTAGCCAGGCCAACGCCCGGCAGCGGGCGGGCCGAGCCGGGCGTACCG
GCCCGGGCAAGGCCTTCTGTCTGTACACGCAGCGGCAGTACCAGCACGAGCTGCTGGCGT
CTACTGTGCCGGAGATACAGAGGACGAACCTGGCGAACACCGTACTGTTGCTGAAGTCCT
TGGGCGTTGAAGACCTACTGGCCTTCCACTTCATGGATCCCCCACCACAGGACACGATCC
TGAACTCGATGTACCAGCTGTGGATCCTGGGCGCGCTGGACGGCACGGGCTCGCTGACGG
CGCTCGGGCGGCAGATGGCGGAGTTCCCGCTGGACCCGGCGCAGTGCCACATGCTCATCG
TGGCCGCGGACATGGGCTGCAGCGCCGAGGTGCTCATCATCGTGTCGATGCTGTCGGTGC
CTTCAGTCTTCTACCGTCCTCAAGGTCGCGAGGAAGAAGCCGACGCAGTCAAAGAGAAAT
TCCAAGTCCCCGAATCCGATCACCTGACCCTCCTACACTTGTACAACCAGTGGAAATCAA
ACAACTACTCCAGTCAGTGGTGCACGGAGCACTTCGTTCACGCGAAGGCGATGAGGAAAG
TGCGCGAGGTTCGCCAGCAGCTGAAGGACATTCTGCAACAGCAGCGGCTGCCGCTCGTGT
CCTGCGGCACCGACTGGGACACCGTCAGGAAATGCATCTGTTCAGCTTACTTCCAGCAGG
CGGCGCGGCTGAAGGGCATCGGCGAGTACGTGAACTGCCGCACCGGCATGCCGTGCCACC
TGCACCCCACCTCGGCGCTGTTCGGGCTGGGCTGCAGCCCCGACTACGTGGTGTACCACG
AGCTCACCATGACGGCGCGCGAGTACATGCACTGCGTCACCGCCGTGGACGCGCGCTGGC
TGGCCGAGCTGGGGCCCATGTTCTTCTCCGTCAAGGAGACCGGCAAATCGAATCGAGACA
AGCGTAAAGAAGCAGCGGTCCACCTCCAACGCATGGAGGAAGAGATGAAGGAGGCCGAGG
CCAAAATGGCAGAAGATCGCAAGAAGAAGGACGAAGACGTTCCCGTGAAGCAGGAGGTGG
CCACCCCGGGGCTGGGCACCCCGCGCCGCACACA
(1714 bp)

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