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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25959_g1_i3
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		speckle-type_POZ_protein_isoform_X1_[Bombyx_mori]
Ontology
GO:0001654 P eye development
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007275 P multicellular organism development
GO:0007349 P cellularization
GO:0007367 P segment polarity determination
GO:0016567 P protein ubiquitination
GO:0030162 P regulation of proteolysis
GO:0031648 P protein destabilization
GO:0042067 P establishment of ommatidial planar polarity
GO:0042308 P negative regulation of protein import into nucleus
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0046330 P positive regulation of JNK cascade
GO:0046331 P lateral inhibition
GO:0048592 P eye morphogenesis
Transcript
Level		FPKM:2.78 TPM:1.45
ORF EntryO_BomoMSG17822_5prime_partial:A_BomoMSG_c25959_g1_i3
Sequence
(Nucleotide)
TGTGCTGTGACTTCTGCTTCTTTTGTTTTTGCAATTATTATTTGATTTATTTTTATAATT
TGGGCACGTTTTCCCGTTAATTTTAGTTGTAATAATTGTTGTGAAGTGAAGAATATTACT
TAAAAGTGAAAGAAAAACGTCAAAGATTTTTCCTCTAAACCTCTCCAAGTCTCAAAGTGT
CACAAAAGTGTATAATCAGCAAACCGCGCGCTCCTCTTGGTTGAAGCTCGGTTCGGGCAG
CGAGTGCGTTGGCGGGTCGGGCGGCGGCGCGCCCTCTCCGCAGTCGGCGCGCGTCTCTTC
GAACGGCGCTGGCGGGATGGCGGTGAGCCGCGTGCCCAGCCCGTTGCACGACGGAAACAC
GCCCGTCGCAGAAAACTGGTGCTTCACACAAGTCAAAGTGGTGAAATTCAGTTACATGTG
GACAATAAACAATTTTAGTTTTTGTAGAGAAGAAATGGGTGAAGTGTTAAAATCATCGAC
TTTCTCAGCTGGTGCTAGTGATAAATTAAAATGGTGTCTTCGCGTCAATCCAAAAGGACT
CGATGAAGAGAGCAAAGACTATTTATCGTTATACTTATTATTAGTCTCGTGTAATAAATC
AGAAGTGCGGGCAAAGTTTAAATTTTCAATATTAAATGCTAAAAGAGAAGAAACTAAAGC
AATGGAATCGCAACGGGCGTACAGATTCGTGCAAGGAAAAGACTGGGGATTCAAAAAGTT
TATCAGAAGAGATTTCCTGCTCGACGAGGCCAATGGTTTATTACCCGAAGATAAACTGAC
GATATTCTGCGAAGTGTCAGTTGTAGCGGATAGCATCAACATCAGCGGGCAGAGCAACGT
GGTTCAGTTCAAAGTGCCTGAGTGCAGATTGTCAGACGATTTAGGAGCTCTCTTTGATAA
CGAAAGATTCTCTGATGTCACGCTAGCCGTGGGCGGCAGGGAGTTTCAAGCGCATAAAGC
TATATTAGCAGCGCGGAGTCCTGTGTTCGCTGCGATGTTCGAACACGAAATGGAAGAGAG
GAAGAGGAATAGAGTCGACATAACGGACGTCGATCATGAAGTATTAAGAGAAATGTTACG
TTTCATATATACGGGCAGAGCGCCCAATTTGGATAAGATGGCCGACGATCTGCTAGCTGC
GGCCGATAAGTATGCATTGGAGCGGCTAAAAGTGATGTGCGAAGAGGCGCTGTGCTTGAG
TCTCTCGGTGGAGACTGCCGCAGACACGCTCATACTCGCAGACCTGCACTCCGCCGACCA
GCTCAAAGCGCAGACCATAGATTTCATTAACACGAGCCACGCGACGGACGTGATGGACAC
GGCCGGCTGGAAGAACATGATCTCGTCGCACCCGCACCTCATCGCGGAGGCGTTCCGCGC
GCTCGCGACCCAGCAGCAGCAGATCCCGCCCATCGGGCCGCCACGGAAACGTGTGAAGCA
GGCCTAGTGAGTAGCGCGCGCCGCCCGCCACTCGCCCCCATACCAAAGACGCGCCCCTCG
GCTCGCACCCGTCCG
(1515 bp)

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