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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25948_g1_i1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		probable_ATP-dependent_RNA_helicase_DDX28_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0019843 F rRNA binding
GO:0035770 C ribonucleoprotein granule
GO:0042254 P ribosome biogenesis
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
GO:1902775 P mitochondrial large ribosomal subunit assembly
Transcript
Level		FPKM:6.00 TPM:3.12
ORF EntryO_BomoMSG17784_complete:A_BomoMSG_c25948_g1_i1
Sequence
(Nucleotide)
CTTAAAATAACAAACAATGTTAGTATTTTTAAATTTTAATTAAATTTATCAAATAACAGG
AACAATAACAGATAGGAACAATGTCTAAATTACGTCAATTAATTAGCACATCTTATAGTC
GTTATTATAGCCTCCAGCAGGCTAAGAAAAAATTACCTATTATAACATGCAAGCGACCGG
AATTCAATCACTACGAAGGACAGAGTTATAGCAAGTATGAAGGTATAAAACTAGCTTCGC
AGGGGTGGCTACACAATAAATCAAAGGGAGACTACTTCATCATACACGGGAATGCAAATA
AAAAAGAAGAAACACCCGTGTATAGGAAGACTTTTGAAGATATCGGCTTGAAAGATAATT
TGGTTAAAGTTGTCAAAGATTTAGGGTTTACGCTGCCCACGGCCATACAAACAAAGGCTG
TACCCGCCATTCTCAATGGACACAATACGGTAATCACAGCGGAGACGGGCTGCGGGAAGA
CCTTAGCGTATTTGTTACCTATAATTCAACATATACTGGAATGGAAGCCAAGTATTCAAG
AAGAATTTAATAGTCCATTGGCTGTTGTTATTACACCGAACAGAGAACTAGCTCTACAAA
TAGGAGAAGTGGCTCAAACAATAGCACAAAGCATAAACATAAATGTCACGACTTTAATAG
GAGGCAAAACGAAAAAAAAAATGTTAAACCCTCCAATTGAGCACAGTGACATATTAATCA
CAACGCTCGGAGCTTACAGTAAACTAGTCACAACTGGAATATACAAGATTCACAATGTGC
ATCATATTGTGCTGGATGAAGCAGATTCCCTTTTGGATGACACATTTATTGATAAAGTCA
CATATCTGTTGAAGAAATTTTCGATACAATATAAAGTTGATATTCAAGTCCCTCCCACAG
GTTGTCAGTTGACTTTAGTTAGTGCAACACTACCTAGGGACCTTCCGGAAACTGTCAATA
GTTTTGTAGCGGCTGAATCACTGAAAATGGTTAGAACTTCAAATATACATCGGATATTAC
CACATGTGCCGCAGAAATTCTTACGTCTCGGGAAGGCGCACAAGCCCGCGGAACTCCTCA
AACTTGTCCAAGCGGATCAGAACGAGAGGAGACCGGTCATGATCTTCAGCAATCAGACGT
CTGGCTGCGACTTCGTGTCCATGTTCCTGAACGAGAACAACGTTGAATGCATCAACATCA
ACGGCCAGATGCCGGTACAGCTGAAGTTGGGGAAGTTTGAAATGTTCAGATCCGGGAAAG
TTAATGTCATTTCGTGTACTGATATCGTTTCCCGAGGATTGGACACTACTAGGACGCACC
ACGTAATTAATTACGATTTCCCTCTGCACACGTCTGACTACATCCACCGGTGCGGGCGCG
CGGGCCGGCTGGGCTCCCCGCCCGGATCCCACGTCACAAGCTTCGTGGCCTGGCCCCGCG
AAGTCGAGCTGGTCCAGAAGATCGAGACCTCGGTCAGGACAAACTCTGACCTGCCCCACG
TTAACGCCAACATCAAGCGGGTCATACGAGACAGGATTGTCAGGATGAGCGGGGCTCTTG
CTAGGGCAAGTTGAGGAGGAGTCGGTGTTGCCAGCCGCCGTCGGTGTAAAAAAAATGTAA
ACTTATAAACGCTTCACTTTCCCCCCTTAGCCTGTCGTGAGTTCTGTCTCAAGCGAGGTT
CGGACTTCGGTTGTTGAGCAAAAAAAAGTGGATCGGATCGAGATTTAAGCATTTTCAAAA
CACAATTAGTTACATTTAATTCTATAGAAGCATTGCC
(1777 bp)

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