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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25923_g1_i5
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		uncharacterized_protein_LOC101743046_[Bombyx_mori]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:3.26 TPM:1.69
ORF EntryO_BomoMSG17703_5prime_partial:A_BomoMSG_c25923_g1_i5
Sequence
(Nucleotide)
GGTTCCCGAACCGATTAGGGCTCACAACCGACTCCGCGCGCCCTCCGTCTGCTCTCGCTG
CTCCTCTCTGCTGTCGCTCGCCGGCGCTGGTGGTTCCAGGTATTCCCTGGACGGTGCCGG
CGGTGGCTTCGTTGCAGCCGCTCCGATCAACTGCAAGCTGTGCCTTGAAGACGCGACCGC
TGACAAGGTCACTATTATAGGCGGCTGTGGTTGCACATTCTGCACTAAGTGTATGAAAGC
ATACGTCGAATTCGAAGTCTGCAACGGCGCGTATGAGGTTTCATGCCCTGACGCGAGGTG
CAGGCTGGGCGCCGCCCTCGCCTTGGACGAGATCTCCGCTCTCGTTGAACCCGCTGTTAT
GGAGAAGCATCTCAAATTCAGGCTCAATCATGAAGTGGCGATGGACTCCGGTCGAGCGTT
CTGTCCCCGCGTCGGATGCGACACGGTGGTGTCCGTCCGGGCCGCCAGTCCCGCACATTG
TCCGACGTGCCGGCACGATTTCTGCTCCCAGTGCAACCAGGAGTGGCACGGCGGGATGAC
TTGCGAGGCGGCGGCGGCCTCGTCTTCGATGGGCGGCGCCGGGGCCCCATTGCTACCGGA
CTCCGAGCTGATCAAGCTCTGCCCGATGTGCAGGGTGCCAATAGAGAAGGACGAGGGATG
CGCCCAGATGATGTGTAAACGATGCAAGCACGTATTCTGCTGGTACTGCCTCGCTTCCCT
CGATGACGATTTCCTTCTACGACACTACGACAAGGGACCGTGCAAAAACAAACTTGGACA
CTCGCGAGCTTCTGTACTGTGGCACCGTGCTCAAGTTGTCGGTATATTTGCTGGCTTCGG
TTTGCTGCTGTTGGTCGCCAGTCCGCTGTTGCTGCTCGCGGCCCCCTGTATCGTGTGCTG
CAAGTGCAGGCTGTGCAATCCAAGCACGAAGAATCTTGAAGAGGTAGACGAGGTCGATAG
CATCAGTCCCGGGAGGGACGACGATGACGAGATCACCCACGAGAGGTCCCGGGATCGATA
TCTGAGCGACTGACACCCGCCAAGGTACTAGACGGTGACGCACGCGTATCAACGTACACC
GGTACTGGCCAGCGACTTACTCTGTGCACAGTTTGTCAGTCAAATACGATGTATCGTGTC
AATCGTCGAAAAACGTTTCTTCGTGTTGGCAACACTGCTAGTTTTTCGTGTTGGCAAGAC
TCAGGCCTGCTCGTCGTTGAGACGATTTATCGTGTAACGTGTTGACCGAAGAACTTGTAC
GTAAATGTGATAAAAAAATATTTTGTGGACGATATTATAAATGTAGAAATTAAAACAAAT
AAATATATATGTGATGAACGAAAATGTTATAACTTAGTAATTTAGGATATGTCAAGTTGA
AATGTTCAAGGAATGTTACTTGGTTATACATTGTGATTTTCGCTTCCCCTTAATTATAGC
TTTGTTGGACGGAACTCAACAGGGCTCAGAGCATTAGATGAAATCGAGATATATATATAT
ATATATATACAAAAATAACTAACTCATACAGTACAAAATGTGTAGCTTCAAATGTATTTA
AACAAAGAAATATACGGGGCCTAATGATCGATGCTTGTATGAAAAAAAAGTCGTATTCGT
ATATTTGTAAATGGCATCGCCTTTTTTAGCTTCTCGACCTAGAACCAAAACTCTGAGAGA
AATAGAGAGAGAGTGAGAGAGAGGTAACTGCATTTAGAGTTGTAATATTTAATGGCGCAA
ACGAACCATACGGTTCCAAGACTTCAGATTGGACTGATGGACTGAGATCTGTTCCTAAAG
ATGAACAAAATGTAGTGCTTGTGGTTCCTACCGCGATGACCTTGATAATACTAAAACTTT
CGACACAGCACGCAATGTAACAAAAACAATCTGCTGAAGCCGGGGTCAACGGACTCTGGC
GATCTTATAGTATAACATTAAGTATCAAAGTTGATAGCTAAGCTTTTTATTTCTATTGTA
TAGATGGGCGAATGGAGCTCATGACCTATAATATATGTTGTTAAATGGTTACCGGAGCTC
ATAGACATTAATCACGACCTGAACACCACCAGTCTCGATTGTATCGTATGATGCTCTCGG
CCTTCGAACAGGAACACGTGACTGTTCACGGCAGAAATTAGCTGGACGGTGATAATTACG
GGCGTGCTATATAACCAGCAAATTTTAGTTAGTAAACCTATATCCATTTTTATCTATGTC
GAACGGTTATGATAAACGCTAATCGTCTCGGCTACCACAATGGGCCGCACATTCCGTACA
GATTTCGTTTTGTATAGCCATTTGACGTTGCGTGCGAGAAAAATAATTTCACATGTTGAT
TTGACAATACGTATATACATAGTGTTTGTAAAAAATTGTTTTGTTCATTGTTCGAAATCG
CTCATTATCGTTTGAAAATTGACAACAAATTTCAGAATGACGTATGTAATAGCAATTATT
TTGAATTTTGGCAAACGACCGTTGATCTTTCGTTCTGAGATAAAATAGCGACTTATTTCC
CCAAACTCATTGATGTACGATAAAAAAAAGAAAACGTCATTAAAAATATATTGTTAACAT
TTATCTTTAAGTGACTTATGTACATAATACTGTTTTTTAAACTTATGAATATGCTAACGC
GACTGTCAAAATCAAAACAAATGTACTTACTTTTTTGAATAAAACATTTTTAGAATCGTT
TTTGTTTGTAAAAATGAAAGGCACGATGGCAACTTATGAAGTTGACTCTCGATAGAACTG
TGTGATGTGGCG
(2772 bp)

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