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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25909_g1_i4
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		probable_ATP-dependent_RNA_helicase_DHX34_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006396 P RNA processing
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:2000623 P negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
Transcript
Level		FPKM:4.10 TPM:2.14
ORF EntryO_BomoMSG17658_3prime_partial:A_BomoMSG_c25909_g1_i4
Sequence
(Nucleotide)
CGATACTCCGCCCGAGGAGAGCATCGAGAATGCTCTGTTGGAGCTCAAACAGCATGGCGC
TTTAACATCGAACGAGAAATTAACAGCGCTAGGGAAAGCTTTATCGAATCTGCCAGTTGA
AGTTTCATTAGCGAAAGCTCTGGTCATCGGGAGCGCAACTTTACAGACGCACAAGAGAGA
CTCTGCTCTCGCGTTGACCGCCGCTTTAGGGATTCGTTCCATTTTCACCACTAGAGCGCA
CCGAGATTTCGATTGTGAGAATGCAAGGAAGCCTGATGAATCAGACCACGGCGACCCGCT
GACATTACTGTCCTTGTACTGCGCTTGGTTGCGTGTCAAAGCCGAGGAGCGCGGCGGGAG
ATGCTGGTGCAAGAGGCGGGGCATCGAGGAACAGCGACTTTACGAGCTGACTAAATTGGC
GGCACAACTAAGGGGCCTCTTGCAGGACAACAATCTATCTGAGACTCCTGAACCGGAGAC
GATGTCTTCAGCGGAGAGGGCGTTACGTCACGGCCAGATGAAACAGCTCAAGGACATGAG
GAGGCAATACAAACAGAAATCGGCTGAAGATTCGAAACGCAAGAAACGTTTGAAGATAGA
CTCGTGGGAGATCGTCGACGAGAATGAGAACGAGGATGACAATGTTTTCGATATAAGGGA
CATTGAATTCCGTATGAGCAACGACGCTCAGAGGATCCAGGCTCTGATATCCGGCTCCAG
CGCGTCCAGTGGACGGGACCTTGTCATGCTGAAGATTGTGTTAGCCAGAGCGCTGTACCC
ACAAGTAGCAGTTGCCGATGAATTCAATTATTGCAAGTCCGTAGCCGAACAATTGTACCA
CACTTGGAGTAAGCCCTTCGTGTTCCTACACCCCACCTCGTATTTCGGGAAGCAGCCCCG
CGTGCTGATGCTGACGGAGGCGGACATACAGACGGACCCGCCCGCCGGGTACAAGAGTAA
ACTACCCTTGTCAGCAAAACACCAGTTACTGTGTTATTTGTCTCTGCTCGAAACAACAAA
GCCGTACATTGTGAATTCCATGAGGATGCCGGCCGCACAGACCCTGCTGCTATTGGCGCA
TTCCATTGATACCAATATAGGATTTACAAGGATAGTATGTGACTCGTGGCTCCTGTTGGA
GTTTCCTTATCCTGAAACCGGGTTAAATCTGCTGATGAAAGCTGTTAGGCTGAGACGGAG
GTGGAACGATCTGGTGAACCGACGACTTGCAGACGCGAACCCAGCGAAGACCGTGGAATC
GGAATTGGAGAAACAGAAGCACTCAAAGTCGTCGTACGAGGAAACACAGTACGAGCTGTC
CTGCGATATCAGTTCGTACATGAACAGCGAAGTTTATTATACGATCAAGAGATTACTACC
GGGCGACCTAAAGATATTGTACTACGGTAATGATGAAGCGCATCCAAATATCGACCCTAA
TCCGTTCGAAGAAGGCTTCGAATGTCGACCTCACGAGAAGAAAGGCGGTGTCTACGTCAC
CGATAATATCGTTTATAATTGCGTCGTCGACACAGATTGGAGTTACAACACGTACCAAGA
AACTTATGGTTTACCTTGGACGTGTGAGAAATGCGAGATGTCGATGTGTCTGTCGCCGCT
GGAGAGACTGCAACACAAACTGTTCACTTGTTCGGCGAGAGCGGTGAAAGAGGAACCCGG
CCCTAGTAAAACTGTAAAGGAGAATAAACCTAATTGCAAGGAGTTTAAGTGCGAGAATTG
CGAGG
(1745 bp)

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