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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25876_g1_i1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		RNA-binding_protein_40_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030626 F U12 snRNA binding
GO:0032502 P developmental process
GO:0097157 F pre-mRNA intronic binding
Transcript
Level		FPKM:12.93 TPM:6.73
ORF EntryO_BomoMSG17595_complete:A_BomoMSG_c25876_g1_i1
Sequence
(Nucleotide)
GTCTATGTATGTATGTACCGTTTAAACTTAAAAACCCTATTTAATTCAATGTAGAAATTC
AAAATTTGTTTCGAATATTGTAAATATGTCGAAAGTACTAATGATTAGGCATTTGCCAAC
TGGCCTTTCATTAGGTGACAAGGAACAACTTTTGAAACATTTCGGGGCTGAATCTGTATG
GGAGAGCTCCAAGAAAAGTAATTATGTTTTCGCATCTTTTGGAACGATGGAGCGTGCCAA
ACACTCTCTACTGCGGCTACATCAACTCGAATTAGCTGGAAGAAGATTAGTTGTCGAATA
TTCTACTGAAAAGGTGCCTGTCACAACAGTAAACAAACAAAAACTTGATTCTGCTGCTAC
CCTCATGATTAAGCGATTCCTGTGTAGTCTTAACGCTTGGAATCCATCCGTAGACTTTTA
TCAGCCCCCTTCACCTCACTTGAAATATCAATATCCGGACATTAATCCAGAGGTAATTAT
TAACATTGTCCATATGCTTCTCAAACATAAGCCTTTTTACATTCAAGTATTGCATCTCAT
GAACAAAATGAGCCTTGATACGCCATTTAATTCAAATATTATAGCAATAAACACTTTCAA
AGAAATTTTCCGAGAATATCTTTTTGATATGGCAAATTCATATAAAAATGACTCTGAATC
AGAACTGTCTAGTGATGAAATAATGGCTACAGATCAACATCCCGTGATCCCTGTTATGGT
GAGAAGAAAACACAAATTGCCTAAACCTTCAAGAAAAATTCCAGCTACTTTGCCACCAGA
AGCAAAAATGAAAAGAATTCCTATAAATCAAGAAGAAGTATTTGATATTACAGCTGTACA
GGAGCCTAAGAAAATATGTGTTATGGTGTCTCAAGACAGTTTACAGAAACCAGTAGAAGA
ACCTGAAGTCATCGGTGAAATTGGAAAATATGACAAAGAAGAAAAGCCTCAAAACATTGA
AGAGAGTATTTCTGAACCTGAACAACCTATAATAACCAGAAAAGAATTGTTAAAGAATCG
TCTATCTCATTATGACATGAAGATTCTGCCAGTATTTAAAAATTACCACCCGGGTCAACC
ATCGTTGAGGCTGTACATTAAAAATTTAGCCAAAAATGTGACCAGTGAAGATGTGGAGAG
GATTTATCGGCTATATGTTGTAGATCTCACTGAGGAAGAACGCCAAGGCTTTGATGTGAG
AGTCATGCAAGAGGGAAGGATGAAAGGTCAAGCATTTGTCACGTTTCCATCGGAGAGGAT
TGCACAAAAAGCACTCACAGAAACAAATGGTTTCATGTTGAAAGACAGACCTATGATTGT
ACAGTTTGCTAGAGCAGCCAATAAACGAACTATAGAATAAATTTGGTACGAATATTTAAA
TTTAGTCTAACAATACACCAAGTGTACTATATACAGGATTTCTTGGAAAGTATATTAACA
AAAATGTATCTAATATCTGTGCCATTTTTTTTTTCATTGGTTAGCGTACTTACCTATTGT
ACTTTGTGGTTTGGATATTCTTGTTCCTGTCTTTCATAAATGACCTATTCACTGCACAAA
TTAATTGAAAAGTGGAGATCGGAAGAGCGTC
(1591 bp)

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