SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25857_g1_i3
Scaffold_idBomo_Chr28
NCBI non-redundant
(nr)		phytanoyl-CoA_dioxygenase_peroxisomal_precursor_[Bombyx_mori]
Ontology
GO:0001561 P fatty acid alpha-oxidation
GO:0006631 P fatty acid metabolic process
GO:0016491 F oxidoreductase activity
GO:0031418 F L-ascorbic acid binding
GO:0046872 F metal ion binding
GO:0048244 F phytanoyl-CoA dioxygenase activity
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
Transcript
Level		FPKM:2.63 TPM:1.37
ORF EntryO_BomoMSG17543_complete:A_BomoMSG_c25857_g1_i3
Sequence
(Nucleotide)
GTTTTATCACTTAATTCACATAAAAACAAGTGTAATAAATGTATTGTGAGTGTACTAATT
ATGCGTATTACGTAGGTACCTACATTGAACAAAAAATTTCCGAGTTCTGTGTGAATAATT
CTTAGTTTGGAAGTTGCTTTTAATTAATTAAAACGTATATTAGTTCAAACTACAAAATGC
CTTTAAAAGGTTTAAAAGTTCTACCTAATCCAGTGTTCTCAGAGCTGCCACAGAACTACA
GATTGTCGGAGGAACAAAAATCATTCTATTGGGAGAATGGGTATCTAGTAATCAAGGAAT
TAATTGATTTCACTTCATTATATAGTTACAAACAGCGCTTTCTGCAAATATGCAAAGGAA
TAGTTGACAGCCCTGTTATGATTGTCAAAGAACAGGCACTTTTTGAGAAGAACTTAAAAC
CTGAAGAATACATTAATAAGCTCCAAGAAATCTTATATGATGATGTGTTCATGACCTATG
GTGAACATCCCAGGCTATTGGATGTGATCTCGCAGTTTATTGGTGATGACATAACGGCTA
TTCACAGCATGTTCATCAACAAACCCCCAGGTACCGCCAGACATCCGCCGCACCAGGATT
TATTTTATTTCCCGATCAGACCTGTGGATAAGATCATAGGCTCATGGACTGCCGTGGACC
ATGTCAATAAGGATAATGGCTGTCTGTATGTCATTCCAAAGTCTCATAAGCAAGATATTT
TATACCCCCATGGTGATGTGCCGGTGCAGTCCACAGACATCACTATCAAGTCTCATTTGT
ATATAACGGCTGTGTGTGACATTACTTCTACAGCAGTGCTTCCCAACGTGGGGCCCATGC
TCCACAAAGGGGCAGTCTGATAATTAAGGGGAGC
(874 bp)

- SilkBase 1999-2023 -