SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25850_g1_i4
Scaffold_idBomo_Chr28
NCBI non-redundant
(nr)		endonuclease-reverse_transcriptase_[Bombyx_mori]
Ontology
GO:0003824 F catalytic activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006310 P DNA recombination
GO:0008152 P metabolic process
GO:0009036 F type II site-specific deoxyribonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0032197 P transposition, RNA-mediated
GO:0032199 P reverse transcription involved in RNA-mediated transposition
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:2.26 TPM:1.17
ORF EntryO_BomoMSG17527_5prime_partial:A_BomoMSG_c25850_g1_i4
Sequence
(Nucleotide)
TGCGGACCCACAAGAGGTCCTACCTCCAGTCCAATGGTATCCCAAAATTTTATACATATA
ATAATAATAATAATAATAATAGCCTTTTTATTCCTAAACATAGGGTTACAAGAGGTCCCT
AAGTTCGGTGTGCCTTTTGGCATAGGCCTCCTCCAATTCCTTCCAATGGGTCCTATCCCT
TGCTACTCTCAGCCAGAATGGTCCCGCTGTCTGCTTCAAGTCATCTTCCCATCTCCTGAT
TTGACGACCCCTACTTCGTTTGCCGTCTCTTGGTTGCCAGAGGGTGACTTGCTTGCTCCA
TTTGTTAATGGGGTGGCGTAGCATATGCCCAGCCCATCTCCATTTTTGGACGTCTATCCG
GGTGAGAATGTCTGTGAGTTTCGTTCTTGTTCTTATGTCTACGTTCCTAACTCTATCTTT
GATTTTTAACCCTAGCATGCTTCTTTCCATGGCACGTTGGCATTTTATTAGCTTTTCCCT
GTGGTTAAGTGTCATTGACCAAGTTTCGCAGCCATAAGTAAGAACTGGTAGAATACAGGT
CTCGAATGTTTTCTTTTTGATGTGATTGCCTAGATCCTTACTTTTCACTATTTCCTTCAG
TGACCAGTATTTTCTCCAACCTTGGGCTATTCGCCTGGTTATTTCCTTGGTCATTACATC
TGAAGGGGATATAATCTGGCCTAAGTAATTATATTCTTTGACATATTCGATCTTGATGCC
ATCTACCATAACGTCTATTTCCCTTGAGTTTGTCATCAATTTTGTTTTTCTGCCATTGAT
TTCCAGACCAGCTTCCCTACTTATATTGGCTAGGCTCTGCATCATTAGTTCTATTGCCGC
AGGATTCTCTTCAAGAAGCACCAGATCATCGGCAAATCTTAGGTGGTTTAGGCGAGCTCC
ATTTATATTTAGACCTAAGTGGTCCCAGTTTAGCTGTCTAAAGATGTGCTCGAGTACGGC
GTTAAATAGTGTAGGGGAGAGAGGATCGCCTTGGCGTACACCCTTTTTGATAGGAAATGA
CTCTCCTGTTGATTCAAGTTTGATACTGGCCTTGCTAGATTTATATATACTCTTGAGTAT
TTCTATATAGTTGCTCTGGACTCCTTGTTGTTCAAGACTCCGCCATATGTATTGGTGCCT
GAGGCTATCGAATGCCTTTGAGTAATCTATGAACGCCAAGTATATTTGTTTATTGTATTC
ATTATACTTCTGTATCAACTGTTTTATTGTATGAATATGATCGATTGTGCTGAAGCCTTT
TCTGAATCCTGCCTGCTCTGCGGGTTGGCTTTCGTTTAGCGTTAATGATATTCTTTCCAG
GATCACTTTAGCAAATACTTTATATATGTTTGATATTAGAGAAATTGGCCTATAGTTCCC
AATCTCGTCTCTAGTGCCTTTTTTATGTAGTAAAATTATGTGACACTCGGTCCATTCTTC
TGGGATTTGCCTTGTTTTTAAGATTTCATTGAAGAGTTTTGCCAGCACAGGACTGATTTC
CTCTAAAGTTCCCTTAAGCATTTCGTTAGGTATCTTGTCCGGCCCTGGAGCTTTCTCGAG
TTTTTGGGATTTTATTGCCTTGGTTACCTCTGAGGCAAGAATCTCTGGCACTTTGTCTAC
TTTGTTTTCATTTGCTTCGTAAACTTCCGGAATTGTGTCCAACCCTGAACCTAATTTATC
AGAATACAATAGGCGGTAATAGTCCGTGGCTAGTTTCAGTATTGAGAGTCGGTTAATTAA
GTTAGATTCGCGTTGGTTCAGTTTCAATATCCATTCTTTCCCGTGTTCGCTTAGTTGCTT
CAGAGCCTTTTTTGTTCCTCCTGTTCTTTTTATATTTTCTTCTAAAACACTATTTCTTTT
CTCTCTACGGTCTTTTCTTATATTCTCCTTAATTTTCTTGCTAAGGTTTGCAATTTTTTG
G
(1921 bp)

- SilkBase 1999-2023 -