SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25829_g4_i2
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		endonuclease-reverse_transcriptase_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0001525 P angiogenesis
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006915 P apoptotic process
GO:0008284 P positive regulation of cell population proliferation
GO:0010628 P positive regulation of gene expression
GO:0010629 P negative regulation of gene expression
GO:0016020 C membrane
GO:0019901 F protein kinase binding
GO:0030335 P positive regulation of cell migration
GO:0032874 P positive regulation of stress-activated MAPK cascade
GO:0033138 P positive regulation of peptidyl-serine phosphorylation
GO:0035023 P regulation of Rho protein signal transduction
GO:0036481 P intrinsic apoptotic signaling pathway in response to hydrogen peroxide
GO:0042542 P response to hydrogen peroxide
GO:0042803 F protein homodimerization activity
GO:0043066 P negative regulation of apoptotic process
GO:0043149 P stress fiber assembly
GO:0043406 P positive regulation of MAP kinase activity
GO:0044319 P wound healing, spreading of cells
GO:0045747 P positive regulation of Notch signaling pathway
GO:0047485 F protein N-terminus binding
GO:0050821 P protein stabilization
GO:0051683 P establishment of Golgi localization
GO:0070062 C extracellular exosome
GO:0071902 P positive regulation of protein serine/threonine kinase activity
GO:0090051 P negative regulation of cell migration involved in sprouting angiogenesis
GO:0090168 P Golgi reassembly
GO:1903588 P negative regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis
Transcript
Level		FPKM:0.59 TPM:0.31
ORF EntryO_BomoMSG17437_3prime_partial:A_BomoMSG_c25829_g4_i2
Sequence
(Nucleotide)
ACGTATGCTCTTCCGATCTGAGAATTTGTAAAATATTCAAAGCGATTTTCTACTACACTC
AAAGAATACTTTAAAGAAGGACAAGCAAATGCTGTTTTTGTGAGCGCTCTTTATTTGATT
CATCAAACAAATCAGATACTGTATACAGTAAAGAGCAAGACTGAGTAATATGTGAAAAAT
GGAAATAGATGTTGATTCTATGGCGCTCTTGCAAAGAACTTACTAGAAAATTACTCTCAC
TAATGCCTATGTTGTTAAACAAAAAAAAAACCACTTTTTCTTCATATCACCTGATGTCTT
CGAAAATTGTTTTTAAAAATCACACATTAAGCTGTTTAAAGGAATTGGGAAAATGCTGTT
TTTAATTATGAATAAAAAAGCTGATTTTATGTTTGACGAATAGTTATCTTGATGGTCACT
TAATAATTAAAAAACTCTATATATGTAGTTCAAAAATATTGAATTTTTGAACTAGACTTT
TTAAATTTAATTATCACATACATGGAAATGGGATTTTACAACAGCTCGAAAACCACTCGC
CTGTCCATCTTCTTGGTGGGATTATTATTCCTGCTACCCTAACAATTCTAAACAGTTGAT
TAGTCTTCTTATGCAACAACAAAGGTATCTTGAGGTGCCAAAGTATTTTGCCTCATAAAC
TGCGGTTGAATTCCGTTCCAGTAGAACGCAAGCAGCTGGCTCAAACAGAGGACCATCAGT
AGAATCTGTAACTTAAAAATTATTAAAAGGACTGTAACTTGTTATGCCACTGTCGCCACT
GACCACTGTATGTAACAATATTTCTTTTAGTACTGTACTTTCCTGTACATTTTCCTGCCC
AGGCTGATAGTTGTGCTTTTGTGTACCTACTGTGTGATCGATTTGCATAGCCAGCTGTTG
AGCAGAGAAACAATCTGTTCATGACTTATCCCTATGATGTTTGAGTGTTTTCCTACTAGT
TCATCCGCAGCGTCATTTCCCCGGGAGCCCTTGTGTCTTTAGATTCATTAGACAGCAGGT
AAAATTCAAGAAATAAGCTTGAGGTGATGCGATGGCCTTTTAAGTGTCGCAGAACAAATT
TGTTGTCTGAAAGTTCTTATATTTATTATTAAAGGTAAAGTGTAAAAATGCTCGGAGTTT
CTCTGAAGGATAAAATCCGGAATGAGATTATTCGACAGAGAACTAAAGTCATCGACATAG
CTCAAAGAGTCAGCAAGCTGAAGTGGCAGTGGGCTGGCCATATATGCCGTAGGACTGACG
ATCGCTGGAGCAGACGGGTTCTCGAGTGGAGACCGCGCAGCGGCAGACGTAACGTGGGAC
GCCCCTTGGCTCGGTGGTGCGATGACCTCCGCACGGTGGCCGGCAAGAAGTGGATGAGGA
GAGCCGCAGACCGTGCTCAGTGGTGTGGATTGGGAGAGGCCTATGTCCAGCAGTGG
(1436 bp)

- SilkBase 1999-2023 -