SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25809_g1_i3
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		exosome_complex_component_RRP4_[Bombyx_mori]
Ontology
GO:0000176 C nuclear exosome (RNase complex)
GO:0000177 C cytoplasmic exosome (RNase complex)
GO:0000178 C exosome (RNase complex)
GO:0000467 P exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0030307 P positive regulation of cell growth
GO:0034427 P nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
GO:0034475 P U4 snRNA 3'-end processing
GO:0043928 P exonucleolytic catabolism of deadenylated mRNA
GO:0071034 P CUT catabolic process
GO:0071035 P nuclear polyadenylation-dependent rRNA catabolic process
GO:0071038 P nuclear polyadenylation-dependent tRNA catabolic process
GO:0071049 P nuclear mRNA surveillance
GO:0071051 P polyadenylation-dependent snoRNA 3'-end processing
Transcript
Level		FPKM:0.00 TPM:0.00
ORF EntryO_BomoMSG17374_internal:A_BomoMSG_c25809_g1_i3
Sequence
(Nucleotide)
TCGGAAGAGCGTCTGGCGGAGAATTGAGAAGGCGTTCAGAAGAGGATGAGCAGATGATGA
GAAAACATTTACAGGAAGGTGATTTGATAAGCGCTGAAGTACAGAATGTATTTTCTGATG
GTTCGCTCTCATTGCATACAAGAAGTTTGAAATATGGCAAGCTTTCACAGGGAACTTTAA
TAAAAGTATTCCCGTCATTGATAAAGCGCAGAAAAAATCATTTTCACAACTTACCATGTG
CAGTATCTGTCATAATAGGGAATAATGGATATATATGGATTAGTCCACACAAAAGTGATA
TTCTTATGGAAGGAAATAAGGATGCAATTGAAAATTATGAAATTCAGCCTGTTGGGAAAT
CAGGAAGAGAAACGATGGCAGATCGGAAGA
(390 bp)

- SilkBase 1999-2023 -