SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25798_g1_i2
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		ATP-dependent_RNA_helicase_DDX3X_isoform_X1_[Bombyx_mori]
Ontology
GO:0000070 P mitotic sister chromatid segregation
GO:0000166 F nucleotide binding
GO:0002168 P instar larval development
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006413 P translational initiation
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0007286 P spermatid development
GO:0010468 P regulation of gene expression
GO:0010501 P RNA secondary structure unwinding
GO:0016246 P RNA interference
GO:0016442 C RISC complex
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0031047 P gene silencing by RNA
GO:0035072 P ecdysone-mediated induction of salivary gland cell autophagic cell death
GO:0043025 C neuronal cell body
GO:0043186 C P granule
GO:0048477 P oogenesis
Transcript
Level		FPKM:18.69 TPM:9.72
ORF EntryO_BomoMSG17334_complete:A_BomoMSG_c25798_g1_i2
Sequence
(Nucleotide)
TCAGAGTGAGAAATTGAGTCTTTCTTGTGGTTTTGTGAATTTGTGTTTGTGCAAAATTCA
TTGTAGACTGTGTTTTAAATATTTTTGGAGCAAAGTTCCCAAAAAAACGTACCGCTTGGT
AGTAATATGAGTAATGTTACCAACCAAAATGGAACAGGTCTAGAGCAGCAGCTTGCTGGT
CTGGACTTGCAGCCCCAGGCTCCTAAGAGTACTGGTCGCTACATACCCCCGCATCTGCGT
AGGCAGTTGCAGGCAACCTCTGATCAAGGGGAAGAGTCTAAGCGCTCAAGCTTAGACACC
CGTCCTAGTGAGTCACGGGACAACCGTTCATCATTCGGAGGCAGCTCTAGAGGCTACGAC
CGTGGTGGTCGGCGCGACGATCGTGATCGTGACCGCGAACGTGATTACGATCGCGGATAC
GAAGCGCGACACCAGCGCAGGGACCGCGGTCGAGACAGTGGATCTCAGAATGGCGAACCA
GAGCGTTGGAATGAATCCGAGAAATGGAATGATCGTGAACGCGAACGGGACCGACGCGGG
CCTCGCGACGTGCGACGTGAGGAGGATTATGAACCACCGGCACCACGGAATGACCGCTGG
AAAGAGCCGGAGCCAAGAGCTGAAGAGCGTTCCAATTCACGCTGGCCTTCTGACGATGTG
CGCCGAACTAGATCTCGCAAAGACGAGAATGATTGGACAGTACCGTTACCTCGCGATGAA
CGACAGGAACTATTGCTGTTCGGCACTGGCAACACCGGGATCAATTTCTCCAAATACGAG
GATATACCGGTTGAGGCCAGCGGAGACCGCGTACCAGACTGCATCACCAGTTTTGAGGAT
GTTAACCTGACAGAACTAATGCGGACAAATATATCTCTCGCTCGCTATGACAAGCCGACG
CCGGTACAGAAGTATGCGATTCCGATTATTTTGTCACGTAGAGACGTGATGGCGTGTGCA
CAGACGGGATCTGGAAAAACCGCAGCCTTTCTTGTTCCCATACTTAACCAAATGTATGAA
GCAGGACCTGTGAAACACATGGGACCTTATAATAAACGGAAACAATATCCTTTGGGCTTG
GTGTTAGCCCCAACGCGAGAGCTCGCCACCCAAATTTTTGATGAAGCTAGAAAATTTGCC
TATCGATCACGAGTCCGACCCTGTGTGGTGTATGGAGGCTCACCTATTAATGATCAGTTC
CGTGAATTAGAGTCAGGATGTCATCTGTTAGTAGCCACTCCTGGGCGTTTGGTAGACATG
CTGGCTCGTGGCAGAGTTGCATTGGATCACTGTCGCCATCTTGTACTCGACGAAGCCGAC
CGCATGTTGGACATGGGTTTTGAGCCACAGATCCGTAAGATTGTAGAGTGCCACACGATG
CCCAAGACTGGCGAACGTCAAACTCTTATGTTTTCTGCCACTTTCCCAAAACAGATTCAA
CTTTTGGCTCAGGATTTCTTATACAATTATGTGTTCCTTGCTGTTGGACGTGTAGGCTCA
ACGTCAGAAAATATTACACAGAAGGTTGTTTGGGTAGACGAAATGGACAAGCGTTCCTTT
TTATTGGATTTACTAAATGCATCAAACTTGCTACAACGTGCACGTCCCGAAGAGGATCAA
CTTATACTTGTGTTTGTGGAAACTAAGAAAGGTGCGGATCAACTAGAAGAATATTTATAT
TCCCAAGGCTACCCGGTAACATCGATCCATGGAGACCGTAACCAACGTGAACGTGAAGAT
GCTTTACGACGTTTTCGAACTGGACAAACACCAATACTTGTGGCAACAGCTGTCGCTGCA
AGAGGCCTAGACATACCGCACGTACGTCACGTAATAAATTTTGATCTACCATCTGACGTG
GAAGAATACGTCCATCGTATCGGTCGTACAGGTCGTATGGGTAACCTCGGTGTGGCTACT
TCCTTCTTTAATGACACAAACCGTGGTTTGGCACGAGACCTCGTCGAACTGCTCGTCGAG
GCTAAACAAGACGTACCTAATTGGCTTACTAGCACCGCAGCTGACGGACGGCTTGGCGGC
GGCGGTCGGCGCACTGGCTCTCGTTCTGGGAATGCTCGTTACGGCGGTAGCGGCTTCGGC
TCAAGGGACTTCCGTACACAACCTCGTCAGGCGGCACGTTCTGCAGGAGCTGGCGGTATC
GGTTCCGGCTTTGGCTATGACGTGGGCTCATATGGTGGTAACTATGGCGGGTCGTACGGC
GGAGGAGGCGGAGGCGGTAACAGCGGAGGTCCCGACTGGTGGGATTCCTAAATTCGTGCG
TTTGACGCCTTCGTCCTATCGTCCCATTAGCGACCAAACCCCGTGAAAATGTGACTAATA
TCACAATGTAGTATTTATATGAAGGCGATATCTATTTATTGTTCTGCAAACTAATTCAGA
ACTAATTTGTACAAACTTAAAATCTTAAAAAATATCCAATATATAATCTCATAAATTTCA
GCCAGACAGGACGCGTTGTTTTTTTTTATCAATATTTTGGAAACGAACAGGTTGATGTCT
AGATTGTTATCATAAGAAATTTTGACATGACAAACATGTGACTAATTTAATGACTCAGTT
CCAAAGAGTAGAGCGTCTGAAATGTGTTCCTATAACATAATCAGGAAGCCACGACACCCT
GTAGTCTTATTTTTATTTTTAGTAAGTATTTATTTCATCTGATATGCTAAATTATATTAC
GAAGGCTGTAAAGAGAAACACAATAAAGTGGTTTTCTTTTAAACCATTGATTCAGTTTTT
CTTTAAAGATTTTCTACATTTTCTTTGTAATTGTATGGAACGGTAATTATTATTTTTACT
TTAACTTCGAAACGGATGTAAACTGCCATTTTTATCTTTTTTCTCTCTGAGGATTGTAGA
TATAAATTATTTTCTAACATGTACTAAATTTCAGATTTTATTTTTTGGAACTGAGGTATT
TAATTAAAATTTATCATTGAATCAGTTGCGTTATATGAAGGCGGTCCGCGATCGTTGAAT
CTCAAACGTGCGATTTGCGACCGTAATCGCCCGGTTGTTACCAATCTGTAGTTTCGCCGC
AATACAAAACAATAAACTCTAATAATTATCATATTATATTTCATTCGAAACACGCGACAA
GACCGCATTCGTGTTTTTTTTTTCTTCAATATTCATGGAGTTATCAATTTATATAGCAAT
ATTTTTGATGTTCAATTTGTATCGTGAAAACCTGAATGTTATTGTGTATTTTCGATTTTC
TATTTTCTGAGGTTTCATCGCTACGTCATCAACTGAAACTTTGAAGCATTTATGCACACT
TAATTCGATGTAGCTATTCATGTAGTTTTAGAAATTCGAATTGAAGCCAACATGGTATCA
TAGGAGATAACTAAATTTGTCTGTAGAGAAATCCTGTAAAATAAAGTCTGTTGTCAACGT
GTTCTAACATAATTTGAATGTGCATCTACCAATAAAAATTAAGAAACAGG
(3470 bp)

- SilkBase 1999-2023 -