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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25786_g3_i4
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		short-chain_dehydrogenase/reductase_family_16C_member_6_isoform_X1_[Bombyx_mori]
Ontology
GO:0004745 F NAD-retinol dehydrogenase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0042572 P retinol metabolic process
GO:0042574 P retinal metabolic process
GO:0043616 P keratinocyte proliferation
GO:0055114 P obsolete oxidation-reduction process
Transcript
Level		FPKM:2.98 TPM:1.55
ORF EntryO_BomoMSG17305_complete:A_BomoMSG_c25786_g3_i4
Sequence
(Nucleotide)
CACTGTTGTGACAGACGATTTTAGTCAGACAGAGCACAGCTGCGTTCGCTTCGCGCTTCG
GTCACTCGTGGCGGTCGCGCCAAACAAAATTTGATTCAGTTAATCGCGACATTAGCATTG
ATGCGAACGTTTCTCGCGTTACAATTAACGAGTTGTTTTGAATTACCGCTGTAAACTTGC
AAAGTTAATTAACTTTAAAAATGGCGTCGGAACTAAGAACAGAAAAGGGGTCTTCTAATG
GATTGACGGATAAAGCTCCCTGGACTGATGAGCAAGGCATAGTGATGAAGGTGTACCAAG
CAGTGATGCTGACTCTGGAGATCGTGACCCTCTATATCAAGATGGTTCTCACCTGGTTCC
ATGCTATGTACCTGCTGGTAGTGCCCCCCGAGCCGAAGAGTGTCAATGGAGAGATTATCC
TTATTACCGGCACAGGCCACGGCATGGGTAGGGAGACAGCGATGAGGTTTGCCAAGCTCG
GAGGCGTGATAGTCTGTGTGGATATCAACCAGAAAACCAATCAGGAGACCGTGGACCTCA
TCAAGGAGCAGAAAGGAAAAGCGTATCGGTTCGAATGTGACGTCACAGACAGCGAGGCAG
TGAAGGCTCTGGCCGAGAAGATCCGTCGTGAAGTAGGCGACGTTACCATGCTGGTGAACA
ACGCCGGCATCATGCCGTGCAAGCCGCTGCTGCAGCATGGGGAGGGGGAGATCAGGGCCG
CCTTCAATGTCAATGTCATGGCTCATCTGTGGTTGATCCAAGCATTCCTACCCTCTATGA
TGGAGCGAAACCACGGTCACATCGTGGCGATGTCTTCGATGGCCGGTGTCCTTGGACTAC
GGAATTTAGTTCCATATTGCGCCACCAAGTTCGCTGTCAGAGGGCTAATGGAAGCGCTGC
ACGAAGAGTTAAGGGAGGACACGAGAGATTTCAGTGGCATCAAATTCACGGTGATCTGCC
CGTACATAGTGGACACGGGACTGTGCAAGAACCCCAAGATCAAGTTCCCGTCGATGATGA
AGATCCTGACGCCTGAAGAAGCTTCCGACTGCATCGTGGACGCGGTCCGGAGGAACTACT
ACGAGATCAGCATACCGACGTCGCTCTTATACGTCAACACTTTTTGCCGTCTATTGCCGA
GGTCTGTGTCCTCGCATTTGAAGGATTTTTTGGATTCAGGACTTGAGGCACAGTAAAATT
TAATATTAAACTAAAATAGTGTTTTTAGTATTAGCGGTTTTAGGAATTTCCGAAGGCTAA
TTTTTTTTCAAATAAAAAATAGTGCCAATTTTTTTTAAAATGAATGTTGCGAATGTATTT
TACTGTTATTTTTTTAATATAAGAATCTAAATGAGAAGATTCTAATCGATCTATATAAGT
TGAGCTGATTTTTGTGATATCAAAATGCGACGGTATATTATTAAGTAATTATATATTAAG
TATATTTAACCACTTGTTACCCGCTTAACATATTCTATTACGGATTAGTTTCCACGGTGA
ATAGGATATATTATAACACGTAAAATAATTAACGCATAAGAACATCGATCCACGCTCTTA
TTTTTCAAAGTAGACGACGGAATCCAGGTCAAAGTGCCGCCAATATATCAATAAAAAACA
AAAAAAAATAATTCAAAACTCTTAATCCATTGGCTGTTTGTAAAATCACTAACAAAATAA
CCATTTATCAATTTACAATATTTAATGAAAGCTGGGTCATTTATATTATAATTTTGTCTT
TGTAATAGAACAAAAGTATTACACTCTTTATGTTACAACAGGTCAAAGCCGTAGAGTGCC
TTCCTTTGCCATGTATTTTTTTGTTTTGCTTAAAGAAACGTGATTCGCGTCTTTAGATCT
TCAGCTTCAGTTGGAATCGAGTCTGCCCTGAACCGGTATTCGGTTCGAAGGTTTTAGCAG
CAGATAGAGATACCGGTGTGGGTTTCACTCGCCTTAAATTAAACTAAGATTAGTAATGTT
AATATTATTCGATTAAAGTTAAAATACATCATTAGTACGCTTCGAGATCCAAACTAAGGG
TTTTGTTTTTCATTGACGAGAAAACATTTTTTGTAATATCTCGTATCAGCCTTCAGAATG
GTGCGGCTTGTAAACATAATTAAATAAAAACAAACTAATGGCACTTGGGGATTGCCGCGG
TAAAGCTATTGCATAACATTTTTTATCATCTTATGCAATTATAATTAGACAATAATAATT
TAATATTAAAACAATACTGAAAGAAGACCACGCTATATTTATAAACATTAACAAAAGCAC
ATTAACTGTCTCTTTCACACTCATAAGCTAGACCGCGCGAGAGAGAGATGAGCAGACTTT
TCATGATGCGCATACAGTGCGACGTCACACCACGCGCTTATTCACAAACACTACACAAGC
GCAACGTGTGAATGTGTTGAACGCGAGCTACATGGTAGGCGGAGTGAGGGGTGTAAGGTT
TTTTTCGTTACGGAATTTCATGATTCGGTCTCCACGCTCAAGGCTCGCGATAGAAGCTAT
GCAATAGCTTAAAAGAAACAATTTGTCTATTTACATGTTTTTATTCATCGTTCACAATAA
AAATATACAAAACTAGTTATGCGTGCGACTTTGTCTGCGTGAGTAATCCTTTAGAAATTC
AATTTATATTAAATCACCCAAAACAAACTAATAATATTCAGATATAGCGCCAACTATCGA
GTATTACGGTGAGCTTAATGATTTTAAATGAAGATTCAAGATAAAGTGTCTAGTTGTTAT
ATGATAACAAACAAACAATTATAAATATAACTACAAAAAATTGTTAAGCATAAGTTTTTC
CGCGCGCACACCGATAGACTTTCATAATTTTATTATGGTTTTATTTACACAATATGCCCA
ACTAAGTACTTATCAGTATGCTGACTTTTACACGACAGATCGGAAGAGCGTCGT
(2934 bp)

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