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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25756_g1_i1
Scaffold_idBomo_Chr28
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC105391048_[Plutella_xylostella]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0019028 C viral capsid
GO:0020002 C host cell plasma membrane
GO:0033644 C host cell membrane
GO:0039660 F structural constituent of virion
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:2.41 TPM:1.25
ORF EntryO_BomoMSG17219_5prime_partial:A_BomoMSG_c25756_g1_i1
Sequence
(Nucleotide)
TGTGCTCTTCCGATCTGTGCGCTTCCGCTCTCACCACTGGATGGATATCACGTTTTGGTT
GTCCGGAGCACATCACTACAGACCGTGGAAGGCAATTTGACTCCCAAACCTTCAGGGATT
TAGCCGCCCTCATAGGTGCTACGCATCACCTCACCACGGCGTACCATCCCGCAGCCAACG
GTCTCGTTGAGCGACTTCACCGCCAGCTAAAAGCCGCAATTATGTGCCACGCAGATTCCA
GCTGGACGGAGGCACTTCCGTGGGTATTGCTGGGAATACGCAGCGCCTGGAAAGAAGACC
TAGGAGCATCCACAGCAGAACTTGTTTACGGTGAACCGCTCCGGTTGCCTGGACAGTTTT
TCACGTCGACGTCAGGAGATGTTGCAGACATGGGCAACCTAGTCAGCAGGTTGCGCACGC
ATATGTCGAAGTTAACGCCGCAACCCACATCATGGCATACAAGTTCAAGCCGACCCTTTT
ATATCCCTAAAGACCTGAGAACAGCGACCCACGTCTTTCTGCGCCAAGGTCCAGCACGAA
GATCGCTGCAAGCTCCATACTTGGGCCCATACAAAGTGCTACGTCGCGACGAAAAGACAG
TGGACATCGAGGTTCAGGGAAAGACGCAGAAAGTCACAATTGACCGAGTCAAACCAGCTT
ATGTGGCACGAGAAGACCTCAACGCTAGTCAATCTAGGATCCAGAGTCCAAATCCGGTGA
CGCCTAAAGAACCAGTCAGGAAGACTAGGAGTGGGAGGATAGTCCGATTCCCAAGATACT
ATCGCCCGTAGTCACGGTCTCGCCGGGGGAGTAGTGTGGCGAGTGAGCAAGTCAACTCGC
ACATCTCAACGAAGCACAGAAATCATACGATTTTACGTCACATCAGGTGATCCGAGTGCC
GTGTGCAAAGAATGTTAAACCACGCCCCCTGCAACATGTCGCCGGCGCATCTTATTTGTC
GGAGTGGTAAAGACACAAGATGGCCACGCTTTGATCTATTGTTCTTCAGGCGGAGGACAT
GTTGAAGGGGGCGGCAACTCCTGCGAGATC
(1050 bp)

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