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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25706_g1_i1
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		spectrin_beta_chain_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005516 F calmodulin binding
GO:0005543 F phospholipid binding
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0007009 P plasma membrane organization
GO:0007026 P negative regulation of microtubule depolymerization
GO:0007274 P neuromuscular synaptic transmission
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0008017 F microtubule binding
GO:0008091 C spectrin
GO:0008092 F cytoskeletal protein binding
GO:0016199 P axon midline choice point recognition
GO:0016327 C apicolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0030424 C axon
GO:0030506 F ankyrin binding
GO:0030721 P spectrosome organization
GO:0031594 C neuromuscular junction
GO:0042062 P long-term strengthening of neuromuscular junction
GO:0045169 C fusome
GO:0045170 C spectrosome
GO:0045478 P fusome organization
GO:0048790 P maintenance of presynaptic active zone structure
GO:0050807 P regulation of synapse organization
GO:0051693 P actin filament capping
GO:0072499 P photoreceptor cell axon guidance
Transcript
Level		FPKM:17.20 TPM:8.95
ORF EntryO_BomoMSG17074_complete:A_BomoMSG_c25706_g1_i1
Sequence
(Nucleotide)
GTCGGTCTTTCGCTTCGCTCGATGCCGTGTTCGTACTCGTATTCACGGATGATAGTACAA
GTCGTTTTTACATGATTAACGGCTACATAAAAGTTTCAGACAAAAAGTGAACTGTGTTAT
GTCAAAAAACTGTTTTCATAGTGTAAGTGGCGTGGAATCCTATTTATTAGTTCTCAGACG
GCTGACCGCCAACTCGCGTATTCTAGTGTATTTAGTGTGCTGACGAATTTTATGTGCTTG
ACTGTGCTGTAATAGCATACCTTGGACTCGCAGGAGAACAGTTCCGAGCGTGGCGTGGTG
AGGCTATAGTTGGTCGCGATGACGACCGACATCTCGGTGTCCCGATGGGACCCGTCCGTC
GGCCACGGACAGGAGATCATTGATGAAATCGAGTACGACGGCGGAAATTCATCGTCGAGG
TTATTCGAACGATCGCGCATTAAAGCGCTTGCAGACGAACGAGAGAGCGTGCAAAAGAAG
ACATTTCAAAAATGGGTGAACTCACATTTAGTTCGCGTCGGGTTCCGAATTGGGGATCTG
TACGTCGATATGAGAGATGGAAAGATGCTTATCAGACTACTCGAGGTGCTGTCTGGAGAG
AGACTGCCTCGTCCAACAAAAGGCAAAATGCGTATCCACTGCTTGGAGAACGTGGACAAG
GCGCTTCAGTTTCTGCGCGAACAAAGAGTGCACCTGGAGAACATGGGGTCCCATGACATC
GTCGACGGCAACCCTAGGCTCAGTCTTGGTCTCATCTGGACTATCATTCTGCGCTTCCAG
ATCCAAGACATTACAATCGAAGAAACCGACAACAAGGAAACGAAATCGGCGAAGGACGCT
CTCCTTCTTTGGTGTCAAATGAAGACGGCGGGTTATAACAACGTGAACGTCCGCAACTTC
ACGACGTCCTGGCGGGACGGGTTGGCGTTCAACGCGATCATACACAAGCACAGGCCCGAC
CTTGTTCAGTTCGAGAAACTGCACAGGAGCAACCCTATCCACAACCTTAACAACGCCTTC
AACGTTGCCGAGGAAAAGCTTGGACTCACCAAGTTGCTTGACGCGGAAGACATCGCTGTC
GACCATCCCGACGAGAAGTCCATCATCACGTACGTGGTGACGTACTATCACTACTTCAGC
AAGATGAAGCAGGAGACAGTCCAAGGCAAGAGGATCGGAAAGGTCGTCGGTATCGCGATG
GAAAACGACAAGATGATGCAGGAATACGAGTCGCTCACCAGCGATCTCCTGCAGTGGATC
GAGCGAACAATCGAGGCGCTCGGCGACAGAACATTCGCGAACTCTCTGGAGGGAGTGCGT
CAACAATTGATTCAGTTCGCGAACTATCGCACCGTCGAGAAACCGCCTAAGTTCGTGGAG
AAGGGCAACCTGGAGGTGCTGCTGTTCACGCTGCAGTCGCGCATGCGCGCCGCCAACCAG
CGCCCGTACACGCCGCGCGAGGGCCGCATGATCCACGACATCAACCGCGCCTGGGAGACG
CTGGAGAAGGCCGAGCACGAGCGGGAGCTGGCGCTGCGGGAGGAGCTCATCCGCCAGGAG
AAGCTCGAGCAGCTCGCCGCCAGATTCAACCGTAAAGCTCAGATGCGCGAGACCTGGCTG
TCGGAGAACCAGCGCCTGGTGAGCCAGGACAACTTCGGGTTCGACCTGGCGGCCGTGGAA
GCCGCCGCCAAGAAGCACGAGGCCATCGAGACCGACATCTTCGCGTACGAGGAGCGCGTG
CAGGCCGTCGTCGCCGTCTGCTCGGAGCTGCAGGCCGAGAGGTACCACGACATCGAGCGT
GTGTGCGCGCGGCGCGACAACGTGCTGCGCCTGTGGGCCTACCTGCTGGAGCTGCTGCGG
GCGCGCCGGGCTCGACTCGAACTGTCCCTGCAGCTGCAACAGAACTTCCAGGAAATGCTG
TACATCCTCGACTCGATGGAAGAGATCAAGATGCGTCTCTTGACAGACGACTACGGCAAA
CATTTGATGGGAGTCGAAGATTTATTACAAAAGCATGCGCTGGTTGAAGCCGACATCAAC
GTACTCGGAGAACGAGTCAAGGTGGTGGTCGGACAGTCGCAGCGCTTCCTGGAGGGCGAG
GGCGGCGCGTACCGGCCGTGCGACCCCGCCGTCACCGTGGACCGCATACAGCAGCTCGAG
AACGCGTACGCAGAGCTCGTGCACCTCGCCGTGGAGCGCAGAAAGCGTTTGGAGGACAGC
CGCAAACTGTGGCAGTTCTACTGGGACATGGCTGATGAAGAGAACTGGATCAAGGAGAAG
GAACAGATCGTCTCCGTTGATGACATCGGACACGACCTCACTACCGTGTACTTGCTGATA
TCGAAGCACAAGGCGCTGGAGGCCGACGTGCTGGCCCACGAGCCGCAGCTAATGAGCGTG
GCGGCGGTCGGCGACGAGCTCATCTCCCAGGGACACTTCGGCGCTGACAGGATCCAAGAA
CGCCTCCGTGACATCCTGTCGCAATGGAACCACCTCCTCGACTTGGTGTCGCTCCGCAAG
AGTCGGCTGGACGCCGCCGTGCGCTACCACCAACTGTTTGCTGATGCCGACGACATCGAC
AACTGGATGCTCGACACCCTCAGATTGGTTTCGTCTGAGGACACCGGCGTTGACGAAGCT
CAGGTGCAGAGCCTGCTGAAGAAACATAAGGACGTAACCGACGAACTCAAGAACTACGCC
AACGTCATTCAGCAACTGAAGCAACAGGCGCAGGAGCTGAGCCCGGAGGACGCCAACAGC
GGCGAGGTGCGCGAGCGGCTGGCGGCCATCGACGCGCGGCACGGCGAGCTGGCCGAGCTG
GCGCGCCTCCGCAAGCAGCGCCTGCTGGACGCGCTGTCGCTGTTCAAGCTGCTCGCCGAG
GCCGACGCCGCCGACCAGTGGATCGCGGAGAAGCACCGCATGCTCGACACCATGCTGCCG
CCCAGCGACATCGACGACGTCGAGATCATGAAGCACAGATACGACGGCTTCGACAAGGAG
ATGAACGCGAACGCGTCCCGCGTGGCCGTCGTGAACCAGCTGGCGCGGCAGCTCGTGCAC
GTGGAGCACCCGCAGGCGCCGCGCATCCAGGACCGCCAGCACCAGCTCAACCACGCCTGG
AGCGCGCTCCGGGAGAAGGCTGAAGCGAAGAAGGATGAGCTTAAGTCCGCTCAAGGTGTG
CAGACATTCCACATCGAATGTCGCGAGACCGTCTCGTGGATCGAGGACAAGAAACGCATA
CTGCAGCAAACCGACGACCTCGAGATGGATCTTAACGGCGTGATGACTCTCCAACGTCGT
TTGTCCGGAATGGAGCGCGACTTGGCCGCCATACAGGCTCGCATCTCGTCCCTGGAGAGC
GAGGCCAGCGCCATCGAGAACGAACATCCCGAGGAGGCACAACTCATTCGGGAACGCGTC
GAACAGATCACTCAGAACTGGGAGCAACTCACTCACATGCTGAAAGAACGCGACTCGAAA
TTGGAAGAGGCCGGAGACTTACATCGTTTCCTGCGCTCCGTCGATCATTTCCAGGCGTGG
CTCACAAAGACGCAGACCGATGTTGCTTCCGAAGATATCCCATCAAGTCTGCCTGAGGCT
GAGAAACTCCTTTCTCAGCACCAAACCATCAAAGAGGAGATTGATAACTATAAGGATGAA
TATGCTAAGATGATGGAATATGGAGAGAAGATTACTGCCGAACCGTCCACCCAAGATGAT
CCACAGTATATGTTCCTTCGCGAACGTTTGAAGGCACTGCGCGAGGGATGGGCCGAGCTG
CAGCAGATGTGGGAGAACCGACAGCAGCTCCTGGCGCAGAGCCTCGAGTTGCAGCTATTG
CAGCGTGATGCCAGACAGGCTGAAGTTTTACTTGCACACCAAGAACACAGGCTCGCCAAA
ACCGAGCCTCCGACAAACTTGGAACAGGCTGAAAATATTATCAAGGAACACGAGGCCTTC
CTCACTACGATGGAGGCTAATGACGATAAGATTAATTCAGTTGTGCAGTTCGCTAATCGC
CTCGTCGAGGAGAGGCACTTCGACGCGGACAAGATTCAGCGCAAGGCGGAGAACATCGAG
GCACGCCGCAATGCCAACCGCGAAAAGGCACTTAACCTCATGGAGAAGCTCCAAGACCAG
CTTCAGTTGCACCAGTTCTTGCAGGACTGCGACGAACTTGGAGAATGGGTTCAGGAGAAG
AACGTTACCGCACAAGACGATACCTACCGCTCCGCCAAGACTATCCACTCTAAGTGGACC
CGTCATCAGGCTTTCGAAGCTGAAATTGCGGCCAACAAAGAACGACTGTTCGCTGTGCAG
AACGCCGCTGAAGAGCTCATGAAGCAGAAACCGGAATTCGTTGAAGTAATTTCGCCCAAG
ATGCACGAACTCCAAGATCAATTTGAAAACTTGCAGACTACCACCAAGGAGAAGGGCGAG
AGGCTCTTCGACGCCAACAGGGAAGTGCTGCTTCACCAAACCTGCGACGACATCGACTCA
TGGATGAACGAACTTGAGAAGCAAATTCAGAGCACCGATACCGGTAGCGATCTGGCCTCC
GTCAATATTCTCATGCAGAAGCAACAGATGATCGAGACCCAGATGGCAGTGAAGGCGAAA
CAGGTTACGGAACTGGAAACTCAGGCGGAATACCTGCAGAAGACCGTGCCTGACAAGATG
GAAGAGATCAAGGAGAAGAAGAAGACTGTTGAGCATAGATTCGAACAACTCAAGGCGCCA
TTACTCGAACGCCAACGTCACCTTGCCAAGAAGAAGGAAGCCTTCCAGTTCCGTCGTGAT
GTCGAAGACGAGAAGCTGTGGGTCCAGGAGAAGATGCCCCTGGCCACAAGCACCGACTAC
GGTAACTCATTGTTCAACGTGCAAATGTTGCAGAAAAAGACTCAGTCGCTGAAGACGGAG
ACCGACAACCACGAGCCCAGGATTCTGACGGTCATCTCTAACGGACAGAAGCTGATTGAC
GAGGGACACGAAAGTTCGCCCGAATTCAAACAGCTTATTGACGAGCTCACTGCGAGGTGG
CGAGAACTTAAGGATGCCATCGAGGAACGCAAGAACAATCTGTCGCAATGGGAGAAAGCA
CACCAGTACCTGTTCGATGCGAACGAAGCGGAAGCCTGGATGAGCGAACAGGAACTCTAC
ATGATGGTGGAAGATCGAGGCAAGGATGAGATCTCTGCGCAGAACCTCATGAAGAAACAC
GAGATTTTGGAGCAAGCTGTCGACGATTATGCACAGACTATCCGTCAATTGGGAGAGACT
GTCAGGCAGCTCACCGCCGAAGAACATCCACTCAGTGAACAAATTTCCGTGAAACAATCG
CAAGTAGACAAGTTGTATGCAGGACTGAAGGACTTGGCTGGCGAGAGACGAGCCAAACTC
GATGAAGCTTTAAGATTATTCCAACTATCCCGCGAGGTCGATGACCTTGAACAATGGATC
ACAGAGAGGGAACTCGTCGCCAGCAGCCAGGAGCTGGGACAAGACTACGATCATGTCACG
CTGCTGTGGGAACGCTTCAAGGAGTTCGCGCGCGAGACCCAGTCGGTGGGCTCGGAGCGA
GTCGGCACGGCCGAGCGTATCGCCGACCAGATGATCGCCATGGGACATTCTGACAACGCC
ACCATCGCGCAGTGGAAGGAGGGCCTCAAGGAAACCTGGCAGGACCTCCTCGAGCTCATC
GAGACGAGGACACAGATGTTAGCGGCGTCCCGCGAGCTGCACAAGTACTTCCACGACTGC
AAGGACACGCTGCAGCGCGTCAACGAGCGCGCGCGCGGCGTCAGCGACGAGCTCGGCCGC
GACGCCATCAGCGTGTCCGCGCTGCAGCGCAAGCACCACAACTTCATGCAGGACCTCACC
ACGCTGCAGCAGCAGGTGGAGTCCATAAAGAGCGAGTGCTCGCGGCTGGGCGCGTCGTAC
GCGGGCGAGAAGGCGGCGGAGATCACGCGGCGCGAGCGCGAGGTGGCGGACGCGTGGGCC
GCGCTGCAGGCCGCGTGCCGCGCGCGCCGCGCCAAGCTGGAGGACGCCGACCGCCTGTAC
CGCTTCCTCAGCCAGGTCCGCACGCTCACGCTCTGGATGGACGACGTCGTGCGACAGATG
AACACCGGCGAGAAGCCCAGAGACGTGAGCGGCGTCGAGCTTCTGATGAACAACCACCAG
TCGCTGAAGGCGGAGATCGACACGCGCGAGGACAACTTCTCGGCCTGCATCTCGCTCGGG
AAGGAGCTGCTGGCGCGCCAACACTACGCCTCCGCGGACATCAAGGAGAAGCTACTGCAG
CTGACGAATCAAAGGAATGCCCTGCTGCGACGCTGGGAAGAACGCTGGGAGAACTTGCAA
CTCATACTGGAAGTGTACCAGTTCGCTCGCGACGCGGCCGTGGCGGAGGCGTGGCTCATC
GCGCAGGAGCCGTACCTCATGTCGCAGGAGCTGGGGCACACCATCGACGAGGTCGAGAGC
CTCATCAAGAAGCACGAGGCCTTCGAGAAATCCGCAGCGGCACAGGAGGACCGGTTCAGC
GCTCTGCAGCGACTCACCACCTTCGAAGTGAAAGAGATGAAGCGTCGTCAGGAAGCGGCC
GAAGCGGCGGAGCGCGAGAAGCGGGAGCGCGAAGCCGCCGAGGCCGCCGCCGCCGCCGCC
GCCGCGCAGGACGCGCTCGACCGCGCCGACACGCCGCACGAGCAGCCCGCCGCCAACGTC
GTAAGGAGAACGTCCACTAAAGCGGCTGAGAAGGCCCAAGAGCGACCCCATTCCCAGCCA
GAGGCGAGCTCCGTCCCGAACCCCGCCGC
(6809 bp)

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