SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25698_g1_i1
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		syndetin_[Bombyx_mori]
Ontology
GO:0000149 F SNARE binding
GO:0005768 C endosome
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0032456 P endocytic recycling
GO:0042147 P retrograde transport, endosome to Golgi
GO:0055037 C recycling endosome
GO:0070062 C extracellular exosome
GO:1990745 C EARP complex
Transcript
Level		FPKM:3.45 TPM:1.79
ORF EntryO_BomoMSG17027_complete:A_BomoMSG_c25698_g1_i1
Sequence
(Nucleotide)
CATGCATAGTATGCGCTACGCACGTATGATCTTGAAGTGTTTCAATAAATAACCAAAATA
AATAACTCAGGTCTTGCAACATGCTGTCCAATGATGTTGTCGAAAACCGCCGTGGTCCTC
CCGGAGTCAACTCGAGGTCGCTCAGCTCTGCTCATTCTGCTGCTGATCTTGAGATCCTAC
GCGAAATCGAGAATGTTTATTTCTCGTCGCCGGTCGACTTCGACGCGGCTCGGTACGTGC
TGGAGCACGCGCCCGCACCCCCAACCTGCGAGTCCATCGAGCATATGTTCACGAAGCTCA
AGAGGCAGCAACAGGTGGTCTCTGGAAAAGCCCTCCATTTGATATCGCAACAGCGCGACA
ATTGCGACAAGGAATTTGCCGAGATCCAAAACATAAGGACCCAGCTCTCCTTAACGCTGC
AAACGTGCAGGAAAGCTAGGGAACACTTGCGGACCGCATCGAACCACCTGACCATGTCGA
CTTTCGTCATATTAGCCAACTTTAGGAAACGTCAGATCATCAGATCGGTCCTGAAGTGCT
TAGAACTGATCCGGAGTTTGAGGAGCGTCGAGAGTGACGTCACGGAGCTATTAAACAAAA
AGGACTTTTACAGCGCCATCGAGCTAATCCTGAAGTCAAGGAAGGCAGCGGCCGCACACA
AGGAGTACGCTTGCATAACGGACTTGTCCAATAGACTCCAAGACACGCTGGTTTTGACCG
AGGAGAAACTGGATTCGGTCCTGTCTAGTTTGTGTTTCAAATTCGATAAGGACGTCTTCA
CGAAGCTGAGGAAAGCGTATGGCTTGCTGGGGAAGACGCAGGCCGCGATGGAGCAACTCC
ACATGCACTACTCGTCGGCGGTGAACGAGTCCTCGGTGGCCGCCTTGAAAAAGTACACCG
GGGAAGCGTCTATAGACACAAAGTTCCAGAATTTGTGTGCTTCGGTACCGTCGGGCAAAG
CGCCCGCTTGCGTCCTAGATCTGTGCGAGAATCTCTTTTATATAATGCGTAGTTATTATC
TATTGGTCGATTGGCATTCGAAACACGACGAAGAGCCCGCCTGCACGAATGTTTTCGATA
TACAAAAGAACGTAAGCCGGGAGTACATAAGGCAGAAGTTGAAGGCCGGTCTGCTCAGGA
TATGGCACGACGTTCAAGGCAAAGTCTCTATATTCTTGAAGAGTTCAGGCCTAGAAGACT
ATCCGTTCGAGAAATTCGTACAAATATTAGGTGTGCTAAGGAAACTGACGCAGATAGGCG
AAGTTTTCTGCGGCGATAAATCGGACGTGCTAGAGGACTTTATAAAGACCCAAAGCGTGG
TTTACATACAGAACTATCATAGAGGCAGGCTGGAGGAATTGAAGTTGTTCCTCGAGAACG
AAGCCTGGGAACAGTGCCCGGTCAAATCGACGTTCAATCTGCTGAATCTCCAAGAGTTCA
AACAGTTCAAGAAGTACCTGAACAGATCTGATGGTGTGGTGACGAAAAATCAATCGGAGA
ACGCGTCCTCTGTCACATCGCAAGACGACAGCGTTTACGTAACGAAATATTTCAAATACG
ATACCTCTTCGAGTCCGTTCGATATGTTCCGAAACGAGAACACGACCAACGATGATATCT
TCGGTCTGGAACCGGATATGCCGAGCGACGATTCCGAAGACGAACCGGACGAGCTGAAGC
GCGACTTCGTCGAAGAGAACGACAGGCACGGATACGCCACGACGGGGAACAACGAAGCAT
TAAGTCCATCGAAAGTGAGGCACAGCGTTATCGTTGCCAACACGACGCTGTCCGTGTTGA
GGAACTGCGGCCAGTACCTGCAGATATGCAGGTACCTGCCTCAAACTGCACTAGAAGTCG
TGGTACTGATGAATCAATTGTACGACTATTATTTCTATACGGTCCATACGTTCTTCACTT
CCGATCTGGACGTTAGCTCGACGACTTTGTACACGACGAAGCTGACGGCCCTTTTGAAGC
GAATCACGAACAGCCTCGAGAATGGTGGAAGCGAAAACCGACATTTTGCAGGCCCAGAAC
AGCCTCACCACTTGGACTTGAGTAGCGAATCGAACCTTCACGGCTTGTCCGAACGAATCG
TCGCCGTCGAAAGCGTTATTTTCTTAGCCAAACAATACGAAATGCTCCAACCGTATCTGG
AAACTATGGTCGCGCCACACCAGCGTCTGATACTGGAGCACTTCCGCGATAACACCTTAG
CCGTTGTCGCGGATCTGAGGACTCCGGTGTACATGTGCTCCGCTTCGAAGTCGGTCGACG
CGAGGACCGCTTTGGTCGCGATGTCGCAAGTCAAATGGGACGTGAAGAACGTAGCCGTCG
AGCACAGCCCGTACGTGGACATGGTCGTGAGGAAGCTGCAAGTGTACGCGTTGAGGATCG
AGAATATATCAAACAGGGTGACGTTGAATCGCGAAGTTCTGAACTCCATATGGACCGTTG
TCTCGAAATACGTGATACACTTACTAGTTGAGGGCTTCTCGAACGCGACCAAGTGCTCGA
ATGGGGGTAGAGGCCTGATGCAACTGGACTACACGCAGCTGCTGCTGAAATTGGAGAAGA
TATCCGGCCTGAAGCCGGTTCCGCATCAGGACTACGTTGACCGGTACGTAAAAGCGTACT
ATCTGCCGCGGAAGGGTCTCGAGGAGTTCGTCGTGGAGCACCCGGAGTATTCGACGAAGC
ATTTGGTCGCTCTAGTGTCCTGTGCCTGCGAAAACAAGAAGGACAGGCAGGCCCTGATCA
GTCTGATCGAAGAGAAGGAGATACCGAATTGAGAGCTGAACTTAAGGGGGGTGTTTTGAT
AATC
(2824 bp)

- SilkBase 1999-2023 -