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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25686_g1_i3
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		ubiquitin_carboxyl-terminal_hydrolase_calypso_[Bombyx_mori]
Ontology
GO:0000790 C chromatin
GO:0003682 F chromatin binding
GO:0004843 F thiol-dependent deubiquitinase
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0035517 C PR-DUB complex
GO:0035522 P monoubiquitinated histone H2A deubiquitination
GO:0036459 F thiol-dependent deubiquitinase
Transcript
Level		FPKM:6.59 TPM:3.43
ORF EntryO_BomoMSG16981_complete:A_BomoMSG_c25686_g1_i3
Sequence
(Nucleotide)
CAAAATATGCAATTAATAATAATTTACGCAATAACATTGTTAGGGTGGGAAAAGGGCAGA
GATTTGGGAACAATAAAACTATAAAACTAAATAAAACAAAAGACTCGACGGCAATAAACG
TAAACAATAACCATTGTTGAATGAAAAATATGCCGGTAGAACTAAACAGTCTTACCGAAG
GCTGGCTAGAATTGGAAAGTGATCCTGGTCTTTTTACTTTACTATTAGAAGATTTCGGTG
TTAAAGGTGTGCAAGTTGAGGAAATTTATGACCTGCATAAGCCTTTAGAGAGCCCGGTGT
ACGGATTTATCTTTTTATTTAGATGGATAGAAGAGCGCAGATCAAGGCGAAAATTCGTTG
AACAAATTGAAAGCTTTGTACGGGATGAGGAGACCATCAATAATATTTTTTTTGCACAGC
AAATGGTACCCAACAGTTGCGCCACTCATGCTTTACTTTCCATTTTACTAAACTGTCCAA
ATCTTCATTTAGGAGAAACATTAAGTAGGTTAAAACATCATACAGTGGGTATGAATCCTG
AAAACAAAGGATGGGCAATAGGAAATACACCTGAGTTGGCTTGTGCCCACAACTCACATG
CCATACCACAAGCACGCAAAAAGACAGACAAAAATGCTGGAGTTTCTACTGGCAGATTTA
CAGGTGAAGCATACCATTTTGTTAGCTTGGTACCAATCAATGGACATTTGTTTGAACTAG
ATGGTCTTAAACCATATCCTATGGATCATGGTCCGTGGGCAGCTGATGAGGATTGGACAG
ATAAATTTAGAAGGGTAATGGCAGAAAGACTTGGTAGAGATGCAGGAGAACAAGTTCATG
ATATTAGATTCAACCTAATGGCAGTTGTACCAGACAGAAGGTTAGCATTAACACAAAAGC
TTGGGGCACTTGAAATAAATCAGAAGAGAGTCAAAGAAGCTATTTCAAAAATAGGGAAAC
ATCTACGGCATTTGTTGGGGAAAGGCAGAGAATACAACGGTCAGAGCGAGCTCATAACTA
GCAATGATATTGATACATCTCTTAATGATAGCATGGTCCACATTAGTGAAGAGACAATAT
TAACAGCATTGCAATCATCACAACTACGCACATATGACATAGATTACACACTACCAATTA
CAATTGAGATTGGTGCTATGGACAGACCTCATCAGGATAGCAGTATTTTATTAGTGGATC
CTGTGGAACAAGGAGCTGTTGTGAAATTCGTTACAGCAAATAAAGATAGTCAAATCATTG
GTGATATCTATCCAACATCAACAACCGCCCTAGTGAGAAGTAATGAATCACCAGTTCTAT
TGTGCTCCGAAATAGCTCCGGAACAGCCCTATAAGTTGAGGAAATTGCTCCTTTCTCATT
CGGAACTTAATGCGCTAATGAGCTGCATTGTCGGTGAAGTGCAATCGTGTCAGCAGGCTC
TAAACGATGAGAACGATAAAAGAGATATGTATAAAGTAGACGATTGTCGACGTACGCACA
ACTACGACGAGTTCATCTGCACTTTCCTATCGATGTTGACGGAACGTGGAGCTCTGGCCG
AACTGGTCGCCGCGCAGTTAGAACGAGGCCGGTCTCCGAGAGTGAGACGACGACGTCCTA
GACCCAGACCCCGAGCGCGACCTAGACCAAGGCCACGTGGAAGAAAATAAATCGCATAAC
TTTCCCAATTGTACCACCAATCTTGTCCCTTCCCGC
(1716 bp)

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