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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25675_g1_i1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		YTH_domain-containing_protein_1_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016604 C nuclear body
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:1990247 F N6-methyladenosine-containing RNA binding
Transcript
Level		FPKM:6.03 TPM:3.14
ORF EntryO_BomoMSG16966_5prime_partial:A_BomoMSG_c25675_g1_i1
Sequence
(Nucleotide)
TGGGTGCTACCCCCAGGCCTTTCAGCCAAAGTACTTGATGGAGTTTTCAAAGTTGACTGG
ATTTGTCGAAAAGAATTGTCATTTAATAGTACCTTGCATCTTTACAACCCATGGAATGAA
GGTAAGCCCGTCAAAATTGGAAGAGATGGGCAAGAAATAGAACCAAAAGTTGCAGAAGAG
CTATGTAGGCTGTTTTCAGAAGATGAAGGTATTGAAATGACTCCTATTTTACGGAAGTCT
AAAGAGGCATCAAAAAAATCATATGTTAAAAGTGGAGGTAACTATCGAACATATCGTGCC
CCATTGGCTTTTAGAGGCTCATCATTTCGACATAGATTAGGTCCAAGAAATAGGAGAAAG
ATATACCAACCACCCAGAAATCGAGTTACAGGCCCTTATAAAAGAAGGTCACCTTCTCCA
TATTTACGGGATCGCTTTCCAATGTGGTTTGGACGTAATCGTGAAAGCTACAATAATACA
AGTTCAGCAGCTGCAGAAGCCTATGTAGCAGAGTATATGCGATCCATGCATCATCAATTG
CCTCCGTTACCATATGTTGCTCCTCCAGGTTTCAGTGGAGCTCTGACACCATATGACGGT
ATACCACCACCACCTCCACCCCCACCTCCACCTCGCTACTATGACCTTGCTGAATATCCT
CGTTCTGTTCTTCTTTATGATAAAAGATCTTATGAACGGTCAGTAGATGAATTTTTATGG
CGAACTGCTGATCGATCTCGGGGGCGAAGTCGTGAACGTGATTCAAGCAGGTCTTATCGT
GATCGACGCTAAGTTTTTTAACGTCCATGTATTGATCTATTTTATTATTACTAAATAAAA
AGTTGTGCTAGAACTGTGAACTTTTTTCATGAATAAGTGTTGTGAACTTTTATACACGGA
CAACCATTTGCTTTGAACATTTTTTTTAAATGGGTTCGAAGTGAGAATATTGAAGTGATT
TTGAAATTATTATTTTGATGGGTCTTTGAATGTGCTGTGTTTATTTAACTGGCCAAAAGA
CAATTTACTTAAAGGAGATCG
(1041 bp)

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