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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25620_g1_i3
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		general_transcription_factor_IIH_subunit_4_isoform_X2_[Bombyx_mori]
Ontology
GO:0000439 C transcription factor TFIIH core complex
GO:0003690 F double-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004003 F DNA helicase activity
GO:0004672 F protein kinase activity
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006974 P cellular response to DNA damage stimulus
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0032508 P DNA duplex unwinding
GO:0070816 P phosphorylation of RNA polymerase II C-terminal domain
Transcript
Level		FPKM:4.92 TPM:2.56
ORF EntryO_BomoMSG16789_complete:A_BomoMSG_c25620_g1_i3
Sequence
(Nucleotide)
CAAATTTCAATTTGTTTTGGGTTGTTTTGAATTTGGATTACTTTGTTATTATAATCTGAA
ACTTATGAATTAAAGAGATTTAAGAACTAATTATTAGGTAGACAGCAGACAGCGAGAACG
ATGTCAGAGTCTTCTAAATCGAAGTCTTTAAATTTGAATCCTTCGCCTACACTACAATGC
AAAGACCTTCACGAATATCTTAAGTCGCGGTCTCCGCAGTTTCTAGAGACTCTTTACAAT
TACCCCACTATATGTCTCGCTGTATATCGCGAATTACCAGAGCTAGCACGTCACTTCGTA
ATCCGCTTGCTGTTCGTTGAGCAGCCAGTCCCACAGGCAGTTGTCACATCCTGGGTCTCG
CAAACATATGCCAAAGAACAAGCAAAAGCATGCACTACACTGTCAGAGCTCTCCGTGTGG
CAGGAGGCCCCCATACCGGGGGGCATGCCGGGCTGGATGCTCGCACAGTCGTTTAAAAAG
AACCTCAAAGTGTCATTGCTTGGGGGAGGCAGGGCGTGGAGCATGTCGTCGTCGCTGGAG
CCGGACGGGAAGGCCCGGGACGTGTCGTTCCTGGACGCGTACGCGCTGGAGCGCTGGGAG
TGCGTGCTGCACTACATGGTGGGCAGCGCGCAGACCGAGGGCATCAGCGCCGACGCCGTC
CGCATACTGCTGCACGCCGGACTCATGACCAGAGACGCAGAAGACGGGTCCGCCGTTATC
ACTCGCGCCGGCTTCCAGTTTCTGCTCCTGAGTACACCCAAGCAGGTGTGGCTGTTCCTG
CAGCACTACCTGCACACGGCCGAGCGCCGCAGCCTCAGCGCCGCCGAGTGCCTGGCCTTC
CTCTACCAGCTCAGCTTCAGCACCCTGGGGAAGGACTACAGCACGGAGGGCATGAGCAAC
AACATGCTGGTGTTCCTGCAGCACCTGCGGGAGTTCGGCCTCGTCTACCAGAGGAAGCGC
AAGGCGGGCCGCTTCTACCCCACCCGCCTCGCGCTCAACATCCTGCGCGTGCGCTGCGCC
GCGCCGCTCGAGGCCGCCGCCGGCGCGCGCGGACACCTCGTGCTGGAGACCAACTACCGC
GTGTACGGCTACACCTCCTCCGACCTGCAGGTCGCGCTGCTCGGCCTCTTCACGGAGCTC
ATCTACAGGTTCCCCAACGTGGTGGTGGGCGTGGTGAGCCGGGAGTCCGTCCGCCAGGCG
CTGCGCGGTGGCATCACGGCCGAGCAGATCATCCACTACCTGGAGCAGCACGCGCACCCG
CAGATGCTGAAGTCAGAGACGGGCGGCATCCGGTCGGCGTCGATGCTGCCCCCCACCGTG
GTGGACCAGATCCGCCTGTGGGAGTCCGAGAGGAACCGCTGCGTCTACACGGAGGGGGTC
GTCTACAACCAGTTCCTGTCGCAGGCCGACTTCGTGGTGCTGCGGGACCACGCCCGCGCG
GCCGGGGTGCTGAGCTGGCAGCACGAGCGCGCGCGGACCATGGTGGTGACCCGCGCCGGA
CACGACGACGTCAAGAAGTTCTGGAAGCGCTACTCCAAGAACAGCTAGTGTCGCCACCGG
GCCGCAGCACGCGCCTGTTGTCACTTTTAGCAAATAAAATAGTTTCGGAATAAAACGTAC
TTGAACATAACGAACTATTCTCCTGCCAACCCTTCAATTGTATTCTACATAAGTATAATT
GGTACTAAAAAAATAAATTTATTTTTTGTTTGCCTGAACAACTTGAAACACTTTTATGTG
AAAAAGACATGTCTGTTAAACAAACGTTTTTTATTTATTTTATTTTTATTGCCAGTGTAG
GCACATGAGTGCGTACAATCCACCTGATGGTGAGTGATTACCGTCGCCCCCATGAACTTC
AACAATGCCAGGGGCAAAGCCAAGCC
(1886 bp)

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