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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25612_g1_i1
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		tetratricopeptide_repeat_protein_21B_[Bombyx_mori]
Ontology
GO:0000790 C chromatin
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007224 P smoothened signaling pathway
GO:0008589 P regulation of smoothened signaling pathway
GO:0021591 P ventricular system development
GO:0021798 P forebrain dorsal/ventral pattern formation
GO:0030991 C intraciliary transport particle A
GO:0035721 P intraciliary retrograde transport
GO:0035735 P intraciliary transport involved in cilium assembly
GO:0042995 C cell projection
GO:0060271 P cilium assembly
GO:0061512 P protein localization to cilium
GO:0072372 C cilium
GO:0097542 C ciliary tip
Transcript
Level		FPKM:6.18 TPM:3.21
ORF EntryO_BomoMSG16770_complete:A_BomoMSG_c25612_g1_i1
Sequence
(Nucleotide)
ATGTTTAATTTTTGCGACATATTTGTGACATAAAACTGAACTATTAGTAAAAAATTCGGA
CTCTGTAGGTTTGAAAATAGTTTCTCATGTCTGGAATGTTAACAAGAGCTCGCGCTTTCT
CCACGGAAGCTCTAAAAGTTGTTAACAATGTTGCTAAGCAACAGTTTGCTGTGTCAATAA
AAGGAGAAGATGCTGTGATCAGCTATGAGAAGAAAGGCAAGGGGATAACCTTGATCCATA
CAAATGTGCCGCAGGCTTTTCAAGGAAAAGGAGTTGGGAAATTATTGGCACAGTATGCCT
TTGATCATGCTTTAGAAAACAGGTTGAATGTGATTTGCAAATGTCACTTTTTAGCCAAAT
TCTACGAAGACAACATTAATAAATATAAGGTGCTAAATGTAAAACTTGAATTAGAATAAT
TTAACCATGGATTTGGCTTGGCATAGATGTAATATTCATTATTATTTACGGGAAAAATAC
TATGGTAATGTTAAGAAAATTTCAAACGAAGCGTTGCAACAAAATCCTAGGAACTCAGAA
TTTATTTTCTATACTGGAATTGCATTGATATTAGAAGGGCAAGTTCATAAAGGGATTTCT
GAACTAACTCCGCTCCAATCAGACAGTGAGATACAATTGGCAGTGATCACTGCTCTAGTT
TATGCATACAAAGTTTCTAATTTACCAGAAAAAGAGGTGTTGTTCAATTTAGAATCAAAA
TTGAAGGAAGAAAAGAAACATGCAAGCATAACTTCATATTACTATTCAGCTTTGTTTTTA
TCATTAGCAGAAATAAATGAAAAAGCATCTGACTATTTAAATAAAGTATTTAGAAAAGAT
CCTAATAATTTAGATTCTATAATTCTGAAGGGATGGAATGACCTGGGCTTGAGTCAGGAA
AAATCACCGAAATCCACTATAGAATGTTTAGAAGCAGCTATCAGAAAAAGTGATAACAGT
ATTGAAGCACTGCTTGGGTTGGCAAAATTGAAATATCTAGCAAAGGACTATGATGCATCA
AATTTAACATTAGATAGACTGATTATTAACAACTCAGGGCAAGTAGTACCCCTTGTCGAG
AAAATGAAAAATGAATTTGCAATGCAGAAATGGGAAGCGGTTTTCGATACATTAGAAAGA
ATATTTTCTATAGATCCAGATAATGTTGAGGGCTTGAAAATGAGAATATATCTTGCACTT
GGTAAACGATCTGATTATATAGAAGCAGCTGATCAATTGAACCGCTTTTTTGGTATACTC
GAAATTGAAGAAAGCCATAATGGACATCAGTTTTACTATACTGCTCAAATCTTTTCTAGA
ATTTGTGGGAGGTCAAGTGCAGTTTTGTCTCAAGCTTATAGATTTGCCCAGTATGCTTCA
GAAATGTATTCAAATAATGTTGACTATCTCAGTGAAGTTGGCTACCAGTGTATCCTTCAG
GCAAAATATAAAGACGCACTGAGTTTCTTTAGAGCTGCAAGTAAATTGGACAATAATTCC
ATCACAGCACTCTGTGGATTGACTCTCTGCCAAATGTTAGAGAATGGTCCGACAGACCAA
ATAACCCAACAAATTGAATTACTTTTTGAGATGCAAGGAACAGAAAAGTTACCACTTCTA
TACTTGTTGTCTGCCCAACTAAATATCAAGAACTCATCTAATGCAGTACCATTGTTAAAC
ACAGCCTTTGAAACAAAATTAAATTTAGCCTCTCGCAATCCCATGAGTTTAATTTACATT
AAGGACTTAGACCCAGATTTTGTTTTAGAAATTTACAAAGAGTACAAAAAGCATTTACCA
AAGAAGC
(1807 bp)

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