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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25578_g1_i2
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		uncharacterized_protein_F21D5.5_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000718 P nucleotide-excision repair, DNA damage removal
GO:0003684 F damaged DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006261 P DNA-dependent DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0006979 P response to oxidative stress
GO:0008152 P metabolic process
GO:0009314 P response to radiation
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016311 P dephosphorylation
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0017076 F purine nucleotide binding
GO:0019201 F nucleoside monophosphate kinase activity
GO:0032212 P positive regulation of telomere maintenance via telomerase
GO:0042769 P obsolete DNA damage response, detection of DNA damage
GO:0046403 F polynucleotide 3'-phosphatase activity
GO:0046404 F polydeoxyribonucleotide 5'-hydroxyl-kinase activity
GO:0046939 P nucleotide phosphorylation
GO:0051973 P positive regulation of telomerase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0098504 P obsolete DNA 3' dephosphorylation involved in DNA repair
GO:0098506 P polynucleotide 3' dephosphorylation
GO:1904355 P positive regulation of telomere capping
Transcript
Level		FPKM:6.38 TPM:3.32
ORF EntryO_BomoMSG16667_3prime_partial:A_BomoMSG_c25578_g1_i2
Sequence
(Nucleotide)
CTTAAATAAATCTGCGAGCCTTTGAACCTATCTTGTTATATATTATAATATTAAACCGTG
TTAAGTACCAATTAAAAAAAATAACCATGTTTGTTAAATATGCCATACAAAAGTTAAATT
CATAAAAACTATGTTAAACGCATTATTCATGCTGTACGTACTATTATCATGTCTCGTTTA
TGCTTTTTGAGATGTTTGTTAGATACACATGCGCCTATTAAACTTCCTCACAACGTACAA
ATAATTGTAGGGCGCAATAAAGAAACAAAAATTAAGGATCAGTCATGTTCTAGACAGCAG
CTAAGCTTAAAAGCAGATTGTGAAAAATGTCATGTAGAGATAAAACAACTAGGGGTAAAC
GCTTCTGGGTTAGATGGTTTTGCTCTTAAAAAAGATGAAGTGTATGAAATTGGACATGGA
TCAACAATTGAGATTTTATTAAACAATCATGTGCATATACTTGAATTTGATCCACCTCCT
GAAAGCCTAACTACCTCACAGAATCAGACATTCAAAAGGAAATTGGAAGATGACAGTACA
TCTCAGAGAAAGAAATCATTAAAAGTGGAACAAGTGTCATCAAGTGTAAAAGAAAAAGTT
GAAAAAGTTATTAGAGATATGTGGGATGAAATAGACAAAGGTGAATTGTATGTGTTTACA
GCTAAGGGAGTGAAATCTAGTGACAAAATAGCATCTTTTGATATGGATGGAACCCTAATC
AAGACAAAGTCTGGTAAAGTTCATCCGGTGGACATAAATGACTGGCAAATAGCATTTCCT
TCAGTGCCCCAAAAACTGAAAGAATTTTTAGAAAAAGATTACAAAATTGTGTTATTTAG
(839 bp)

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