SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25547_g1_i3
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		probable_ATP-dependent_RNA_helicase_DDX46_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0010501 P RNA secondary structure unwinding
GO:0015030 C Cajal body
GO:0016020 C membrane
GO:0016607 C nuclear speck
GO:0016787 F hydrolase activity
Transcript
Level		FPKM:0.00 TPM:0.00
ORF EntryO_BomoMSG16579_complete:A_BomoMSG_c25547_g1_i3
Sequence
(Nucleotide)
CTCTTCCGATCTGGGACAGAAAAAGTGATAAAAGAGATGATAAAAGAAATGGATCTAGTA
AATCATCGAGAAAGAAGTCACCGGAGAAGGAAAGGGAGAGATCAAAATCAAAGGAAAAGA
GTAGCAAAGCTGATTCTTCTGAATATAACCCGGGCTCTGTTGACAAGGAAGAAGAGCAAA
ACCGCTTGGAAGCTGAAATGCAAAAACGTCGTGAACGCATAGAGAGATGGAGGGCTGAAC
GTAAACGTAAAGAAATCGAATCCGCTAAAAAAGAAGTTCAAAAAGGAAGCATTGTTACTA
ATATACAAATACCGACATCAAAGAAATGGTCACTTGAAGATGACTCTGGTGATGAAGCTT
TGCCAGGTGAAGATGCGGAAGGAAAAGAAAAAAACAATATAGGAGAAAAGAAAGAAGAAG
AAGATGAAATTGATCCTTTGGATGCGTACATGCAAGAAGTGCAACAAGAAGTGCGTAAAG
TCAATCAAATGGACCAAGCCAAAGGAATTATTAGTGTTCCAACAACAGGTGGCACTGGCA
TTGTAATTCTTACTGGCACTGCCAAAAAAAAGGTCACTGAGCAGAAAAATAAGGGTGAAC
TGATAGAACAAAATCAAGATGGCTTGGAGTATTCGTCTGAAGAAGAAACGGAAGACATAA
AAGATGCCGCTGCAAATCTTGCTTCCAAACAGAGGAAAGACTTGATCAAAGTAGACCATG
CTAGTTTAGACTACATGCAATTTAGGAAGTCATTTTACACAGAAGTGAATGAACTAGCAA
GAATGACACCAGAGGAAGTAGAAACGTACAGGACTGAGTTGGAAGGTATTCGTGTCAAGG
GAAAAGGCTGTCCGAAACCGATCAGGACATGGGCGCATTGCGGTATCAGTAAAAAAGAAC
TTGACATTCTAAAGAAGTTGAATTTTGAAAAGCCCACCCCGATACAAGCACAAGCGATTC
CTGCTATTATGTCTGGAAGAGATCTAATAGGAATTGCGAAGACTGGTTCAGGCAAAACAT
TAGCGTTCATCCTGCCAATGTTCCGGCACGTGTTGGACCAACCGGCGTTAGAAGATACAG
ACGGACCAATAGCCCTCATAATGACTCCTACAAGGGAACTCTGCATGCAGATCGGCAAAG
ATATAAAGAAGTTTGCAAAGTCACTCGGATTACGTGTGGTTTGCGTTTATGGGGGCACCG
GGATATCGGAACAGATAGCTGAACTGAAGCGTGGTGCCGAAATGATAGTGTGCACCCCGG
GACGCATGATCGACATGTTGGCCGCCAACTCTGGGCGCGTCACCAACCTGCGCCGCGTCA
CGTACGTCGTGCTCGACGAGGCCGACAGAATGTTTGACATGGGATTCGAACCACAGGTAA
TGAAAATCATAGACAACATAAGACCCGACAGGCAGACCGTGATGTTCAGCGCAACTTTCC
CGAGACAGATGGAGGCTCTCGCTCGTCGGATATTACAGAAGCCAATCGAAATACAGGTTG
GTGGAAGAAGTGTGGTCTGCAAGGATGTGGAACAGCACGTCGCTATACTAGAGGAAGAAG
CTAAATTCTTCAAACTGCTGGAACTCCTCGGACTCTACAGTCAAATGGGAAGCATCATTG
TCTTTGTGGACAAACAGGAGAACGCCGACAGTCTGTTAAAAGACCTCATGAAGGCCTCGT
ATTCTTGCATGAGCTTACACGGAGGGATTGATCAATTCGACAGGGACTCGACGATAGTCG
ACTTCAAGAACGGCAAGGTCAAGTTGCTGGTAGCGACCAGCGTTGCTGCCCGAGGGCTGG
ACGTCAAGCAACTAGTTCTGGTGGTCAACTACGACTGCCCGAATCACTATGAAGATTATG
TGCATAGATGTGGACGCACCGGGCGCGCCGGCAACAAAGGGTTTGCCTGGACCTTCCTCA
CTCCGGAGCAGGGTCGGTACGCGGGCGACGTGCTCAGGGCCTTCGAGCTGGCCGGAGTCA
GTCCTCCCGCCGAACTAAAGAACCTGTGGGAGAAGTACAAGGAGGCGCAGGAGAAGGACG
GGAAGAAGGTGCACACGGGAGGCGGATTTAGTGGGAAAGGTTTCAAGTTTGACGAATCTG
AAGCCCAGGCTGCTTCGGAAAAGAAAAAGTACCAGAAGGCGGCTCTCGGCCTCCAGGACT
CCGACGACGAGGACGTGGAGGGAGATCTCGATCAACAAATCGAGACGATGCTCGCTGCCA
AGAAGATTGTCAAGGAAATTAAACCGGGCGTGGCCGTGTCCGGTCCCGCCGCGGCTGCTG
CTAGCGCGACGGACGGAAAGCTGGAGTTAGCGCGGCGGCTCGCGTCCCGCATCAACCTCG
CCAAGGGACTCGGCGCAGACCAGAAGGGCGCCACGCAACAAGCCGCCGAGGCGATCCTCA
AGGGCGCGCCTTCGCAGACACTCATCACGGCTAAAACAGTGGCGGAACAGCTGGCCGCGA
AGTTGAACACGCGACTCAACTACCAGCCGCGAGACGACAACACAAACGAACCGACCGAGG
AGGTGTTCCGCAAGTACGAGACCGAGCTGGAGATCAATGACTTCCCGCAGCAGGCCAGGT
GGAGGGTCACTAGCAAGGAGGCGCTAGCTCTAATCAGCGAGTACTCAGAGGCCGGTATAA
CGGTCCGCGGCACGTACGTCCAGCCGGGCAAGGCGCCGCCCGAGGGCGAACGCAAGCTGT
ACCTCGCCATAGAGAGCTCGCAGGAGCTGGCCGTTGCCAAAGCCAAATCCGAGATAACGC
GGCTCATCAAGGAAGAGCTCCTCAAACTCCAGACCTCGGCCCATCACATGGTCAACAAAG
CTAGATATAAAGTTT
(2835 bp)

- SilkBase 1999-2023 -