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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25530_g1_i3
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		probable_ATP-dependent_RNA_helicase_DDX20_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008380 P RNA splicing
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
Transcript
Level		FPKM:9.98 TPM:5.19
ORF EntryO_BomoMSG16523_internal:A_BomoMSG_c25530_g1_i3
Sequence
(Nucleotide)
GCAACATAGTAAAACAAACTCAGAACAGATTTGAACAATTGATTTTAATTTTATCCAAAA
TGCAGTTCAAACAGTGTTTAATATTTTGCAATTATCAAGCAAGAGTTACAGAACTTCATA
GATTATTAAAAAAATCTAAATGGCCAGTGAGTTTATTACATGGTCAACAAGAACAACTAG
ATAGGTTAAATGCATTGAAAACATTACAAGAATACAAATGCAGGATATTAATATCAACAG
ACTTGGCTGCCAGAGGTATAGATGGATCTAATATTGATCTAGTCATAAACTTTGAGCCTC
CTTTTGAATGGCAAACATATTTGCATAGGATTGGAAGAGCAGGCAGATTTGGCTCTTATG
GGATTGCAGTCACAATAATTAGTGAAGGTAAAGAAAGTCAAAACTTTAAGAACATGTTAA
CTTTATTAACTCCTACATTCAATCTTACTAATTTATGGACAGACGAAATTTTTAATACAG
AAAATCGAGAAAATAATTCGATGGAAAATTGTGAAAAATTAGAATCACATTTGAAAACAG
AGAAAAATGAAAGACACGGGGAGTTGTGGGGATTACTGACTGAAAAAGATTTACAACTAC
AAGCGTGTTATTTAAAAAATAATAATGACCCAGTTGATAAATCAAATAAATATGGGATAG
AATCATTTACCAACTTAGTTAATTCATTTCAAGAAGAAAAAGAAACCATTCAAGAAGTTC
CCTATAGCTTTATGAATGAATTGCCTTTGAAAGTTGAAAATGATCTTGAATTATTCAACA
TACCTTCTACATCTACTAATGGTGTCATAGACAAACAAATTAAAGGACAAATAGATAAAG
ACAATGAAATTATTCAACATAATGGCGCGCAGAAAGAAGAAATTATAGAAATCCTTAAAA
CAAAAGATAAATTCTTCAAAGAGGAAAACAATCAAAATTTAATAAACAAAGCCATGCTTG
AATCAGGGCTTCCTATATGTTTTGGTAAAACAAAACTAAAAAGATCTGGTGCAAAACAAT
ACAAACATAAATATAGGGTCTGTGATCATGACAAAGATTCATCTTTAACCAAAAATACAA
CAGGAAATTTATCAGATAAAAATGAAGAAATTAAAGCAGTAGTTCAAGATATGATGCAAA
ATGAAACAAAAATTCTGAATAAGAATGATATTAGAAATAAGAAATCATCTAACCATTCTT
TAAAAACGAAATCCGTCTGTGATCTAGAAGAAACTATTAACACGAAAGTTGAATATGGCT
ACACTGTTTGGTATAATACATTAAAAAATTACATGAGGCAGATCGGAAGAGCGT
(1314 bp)

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