SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25503_g1_i2
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		presenilin_isoform_B_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0002027 P regulation of heart rate
GO:0004175 F endopeptidase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005770 C late endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005887 C integral component of plasma membrane
GO:0005938 C cell cortex
GO:0006508 P proteolysis
GO:0006509 P membrane protein ectodomain proteolysis
GO:0006816 P calcium ion transport
GO:0006915 P apoptotic process
GO:0007010 P cytoskeleton organization
GO:0007219 P Notch signaling pathway
GO:0007220 P Notch receptor processing
GO:0008233 F peptidase activity
GO:0008593 P regulation of Notch signaling pathway
GO:0015677 P copper ion import
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0016337 P cell-cell adhesion
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0030018 C Z disc
GO:0042803 F protein homodimerization activity
GO:0042987 P amyloid precursor protein catabolic process
GO:0043025 C neuronal cell body
GO:0043066 P negative regulation of apoptotic process
GO:0046331 P lateral inhibition
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0048471 C perinuclear region of cytoplasm
GO:0048812 P neuron projection morphogenesis
GO:0050435 P amyloid-beta metabolic process
GO:0055037 C recycling endosome
GO:0070765 C gamma-secretase complex
Transcript
Level		FPKM:14.28 TPM:7.43
ORF EntryO_BomoMSG16456_3prime_partial:A_BomoMSG_c25503_g1_i2
Sequence
(Nucleotide)
ACCAGTTTGACTTTTATGGTTTTACCTACTTTGTCGTGAGTTTTATCTTTGTGTTTTTTT
AAGATACTACGCCTACGCCTACATTTAAACCTTGCCTTTTAACAAAATGCGAGCATTATT
CCAAAGATAATTGAATGAGTGAGTCAGGCAGTGACTTAGACGCAACCGAGCACACTGCAC
TCATGGACGGCCACATCGCAGAAGCTCGTCCTGACAGGGAGTTAGCTGAAAGGATAGCTA
GGAAACGAAAGACTAAATCCGATAATCAGCGCTCCTATGGCAGTGTAGAACAGATTGAAG
GTGGCCCATCGGGGGCTTCTATTGCCCAGCAACCTCGAGTTCCAGCAGCACCAGTGGAAC
CACAGATTGAGGAGCTGGAGTTGAAGTATGGGGCTCGCCATGTCATCAAACTGTTTGTGC
CTGTCACATTGTGCATGCTCGTAGTTGTTGCAACAATATCATCTATAAATTTTTACTCCG
TTAAAGATGTATATTTGGCATATACACCGTTTCATGAAGAGAGTCCATACGCATCAACAA
AAGTGTGGAATGCATTGGCCAATTCGATGATCTTGTTGTGTGTGATTGCATTAATGACGG
TGTTACTTATTGTGCTTTACAAGAAAAAATGCTACAAGACTATTCATGGATGGTTGATTC
TATCATCATTAATCTTGCTGTTTCTATTCTCTTACTTGTATATTGAGGAAGCACTCATTG
CCTATAATATACCAATGGATTATATAACTTTAGGCTTTGTGTTGTGGAATTTTGGAGTCA
TGGGCATGATTGTCATACATTGGAAGGGTCCGCTGAGGCTACAACAAGCTTACTTGATCT
TCATTGCAGCCCTTATGGCACTTGTGTTCATCAAGTATTTGCCGGAATGGACAACATGGG
CCGTTCTTGCAGTGATATCTATTTGGGATTTGGTGGCTGTATTAACACCGAAGGGACCTT
TGAGAATATTGGTTGAAACAGCACAGGAACGCAATGAGCCTATATTTCCAGCTCTCATTT
ATTCATCGACAGTGATGTACTGCATGGCGGCAGCGAGCCCCGCGCCCGGCGCCGCAGGAA
CTGTCGAGGGCGAAGGTCGCGACGGCACGGAGGCGGGGGGCGGGGAGGCGGGGTTCGACG
CGGCGTGGAGGGAG
(1154 bp)

- SilkBase 1999-2023 -