SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25477_g1_i3
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_probable_phospholipid-transporting_ATPase_VD_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004012 F ATPase-coupled intramembrane lipid transporter activity
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0015914 P phospholipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0045332 P phospholipid translocation
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.76 TPM:0.39
ORF EntryO_BomoMSG16391_complete:A_BomoMSG_c25477_g1_i3
Sequence
(Nucleotide)
TCTTCCGATCTCTTCCGTTGTTGGCCCATGGCGGCGTGCAGCCTTTTGGTTGTTGAGAAG
ACAACAGCCTGTTATTGATAATTGTCATATGACTGTAGTACCAAACCATTTAGTGCCAGA
TAAAACACCACCAAAAGACCATCCTAATGGACATAGGTGCAACAATAAAATTAGGACTAC
TAAATACACCTTACTGTCATTTTTACCAAAAAATTTATTTGAACAGTTTCATAGGATCGC
AAATGTGTATTTTATTTTTATTGTGTTGTTGAACTGGGTGCCAGCTATAAGTGCATTTGG
CAAGGAAGTGGCTATGCTACCTGTGTTGTTTGTGTTAGGTGTGACGGCTATTAAAGACTT
GTTTGAAGATCGGAGAAGACACATGTCAGACAAGAGAATCAACAATTCATTTTGCAGAGT
ATACAAGAAATCAGCCGAAAGATATGTTAAGGTGAAATGGAGGGACGTTCGAGTCGGCGA
CCTCGTTCACTTGTCTAACAACGAAGCGGTGCCAGCTGATATGGTGCTGCTGCACTCCTC
CAATCCAATGGGGATCTGCTACCTGGACACGTGTAATCTGGACGGAGAGACAAACTTGAA
ACAGAGAATCGTCGCACCGGGCTTCAGAGAAAAGCGACTTGATTTTAATCCAATGAAATT
CAGAAGTTCAATAGAAGTCGAAAGGCCTTCAACGAAAATCTACAGGTTTACTGGTACAAT
ATCCCATCCGAACGGCGAAAGGGTGCCACTGAATTCGGAAAATTTACTTTTAAGGGAATG
CACGATCAAGAACACGGATTACGTCGAGGGTATCGTTGTGTACGCGGGACACGAGACCAA
AGCCATGCTGAACAACGGGGGACCGCGATACAAATGCTCCGGTCTGGAGAAGAAAATGAA
CACAGACGTGATTTGGTGTGTTTTAGTGCTGCTATTCCTCTGCTGCGTTGGCGCCGCCTG
TTACAAAGTCTGGTTGGACCAATACTTTCCCAATTTACTAAGATACACGCTTTTCATTCC
GCAAGCTGACAAACCACCGGCGTACGAAGGCCTACAGATATTCTGGACCTACATTATAAT
ATTACAAGTCATGATACCAATATCTCTGTACGTGACTATTGAGATGACGAAACTATTGCA
AGTCTATCATATACATCAAGATATAGAAATGTACGATCCGGAGACGAACATCAGAACCGA
ATGCCGAGCGCTCAACATAACGGAGGAACTGGGACAGATAAGTTACTTGTTCAGCGATAA
GACCGGAACGTTGACCGAGAACAAGATGGTGTTTAGGAGATGCACCGTTAACGGTGTCGA
TTACGATCACCCGCCTGGACCCCCCGCGGAACCCTCGACCGAACTCCCGCCCATTGTAAC
TCCTCTAACCCAAGTATCGCCAAACCGAAGACTGCTCCAACATCTAAACGACACAAACGA
TGCTCAACACACGCAAAAGGTTCGCGAGTTCCTCTTGATCTTGGCCGTCTGCAATACGGT
GGTCGTGAGTCAGCCTCACGTGGACACGATGCAGCTCAGCATGTCGAATTCGGGCGAAGA
ACTGACGAACAACAGGAAACCATCGAGATCGAATGGTACATTACGATCAAACGACAAGTA
CGCTCGATTAACGGAATCGCGATCGACGACGCCCTCGCCACCGCCCTCGACCGTTTCCCC
CCTGAAGATACGTCTGCCTAAACTGACGTTTGGTAGCAGAGACGACAACACCAGTGAACC
GAGTACATCTACTGAACAACAGATCGCTCGTTTTGAAGCGGAAAGCCCGGACGAGCTAGC
ACTCGCTGAGGCGGCTCTCGCGTACGGCTACGAGCTGAGAAGCAGGTCGCCTGACGAGGT
CGAGGTCGGGATCAAGGGGGAGGTGAGCCGCCTGAAGGTGCTTCGGGTGCAGCAGTTCGA
CTCCAACCGGAAATGCATGTCCGTCGCGATGCGGACGCCTACCGGTCAAGTAGTTTTGTA
CGTAAAAGGCGCTGATAGCACAGTGCTGGGCGCCTTGGCACCGATGCGGGCCGGCTCGGC
GGAGGCGGCGGCGTGCGAGCGCACCCGCGCCCTCATCAGCGAATACTCGCGCGCCGGCCT
CCGCACGCTGGTCATGGCCAAGCGCACCATGCAGCCCGCGCTGTGGGAGGAGTGGCTCGC
CAGCCATACCAGAGCCTCGGAGATCGGAGAAGGCCGCGATAAGAGGATACGCGACTCGCT
GACTCGGCTCGAGAGTGCCCTGACGCTGGTGGGGGCCACGGGGGTCGAGGACCGGCTGCA
GGAGGACGTGCCGCGCACCGTCCGGGCGCTGCTCGACGCCGGGATCATCGTGTGGGTGCT
GACCGGGGACAAGCCGGAGACCGCCATCAACATAGCGTACTCCGCCTCTCTGTTCTCACA
GAGCGACCGGCTGTTGCACCTCATGTCCAGGGATAAGGAGCACGCGGAGT
(2450 bp)

- SilkBase 1999-2023 -