SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25462_g1_i5
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		mucin-5AC-like_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0045892 P negative regulation of transcription, DNA-templated
Transcript
Level		FPKM:11.28 TPM:5.87
ORF EntryO_BomoMSG16331_complete:A_BomoMSG_c25462_g1_i5
Sequence
(Nucleotide)
AGATAAACGGACGCGATAACGATAATCAACTGGTATAAAATTACTATCGAAATGCTCTGT
CGGCATTTCGTTCAGTGGAGTGACGGCGTTTGCGGCTTGCGACAAAAAAGTTAATCAAAA
AAATGTTCGGTCCGCGCCGATACAGTTCTGTGTTAGTGTTATTTGTAGTGATTTTCCTAA
ACGTGAAATCCTATGCACAACAGTGCTACGTGTGTCGGGACTGCAACGTGGTCTCATCAG
AACACATTCAAACCTGTAGTCCCAGAACGACAAACTCCCCACAAGAAACAGATGCAACTT
CCACCCTAAAAGCTGAAACAACCACTAACAGTTATAATACAGCAGATCCTGTTACAACAT
CTACAACGGCTTCTCCTACTGAAACTACACAATCCACAACACCACCAAATATTTACACCG
TTATTACTTCTTTGCCAGAATTAACAACAACTACCTCAGAACAATCTCCAACAACAATTA
CTGTACCAACTGACACATTATCAACTGATGTCTCTCAAACTATAACGGAAAGCCTGCCTG
TAATAACAAATACTATTTCATTTCAAACGACGTCTCAGTTACCTATTGAAACAACTTCAG
CAATATCTCAAACAACAACGAATTCAGCAAGCGAAATAACGGCTGTTACAACTGCTATGC
CGTCCGAAGCGACAACATCAGCACCACCTCAAACAACTAATAATATCCAAACTGAAAGAA
CAACAACTGTGCCTCAAACAACTTCTGATATACCAATCGATATAACAACTACTATAGCAC
CTCAAACAACTACTGATGCACCAAACGAAATAGTAACAACTGAACCGTCTGAAACTACCA
CTAATGTGCCAAGGGAAGCAACGACAATTGCAACCCAAACACCTACTGATGTTCCAACCG
AGATAGCAACTGAACAGCAACCAATAACAACCGCTGCAATTTCGGCAGAAACTACCATCG
CACCGAATACAATTATTTCGGTTGATACTACGATAATTCCGGCAGAATCTACACCATCTG
AAATGACAACATCCGAATCTATTAACATTAGTCCCGAAACAACAACTTTATCATATCCAG
AAATAACGCTGGACGTAACAAGCAGTACACTTTTGCCTGAAGAAACAACAGCTAACTCAG
CGCTTCCATCCACAGTACCACCAGCGACAATTTCACCTATTGTAACCACGACTACTGCAC
CAATTGAGTTCACAAGCACAGTCATTTCAGCTTCAACAACCAATCCCCCACCCATAACAA
CGAACGGCTATACAGAAATATCAACAAATTTACCAACAACAGTAATTCCACAAACTACAG
ATTTGCCTACGACGGAATTTAGTGTTACAACAGGTTCTCCCGATCACATAGTAACTGAAA
GAAATCCCAGTGGGCCACTAATAACTAGGGATGATTCAGATATTCAAACGACCGAATCAC
AATTACCTCAAGATACGAATGCTCGTGTTGGATTTTTGAGAACAATTAGATCCTTGAAAA
GTGGTTCAGAAATTGGCTGCGTCACGACAACGTATGAAGAAAACGGAAGATTGACTACTG
TTAGAGGTTGTACCCACACCAGTGACGATCCTGAGGTCAGCTGCCGTGAGGTCATCGGCG
ACAATTTCAGTGGAGCATTATCGTCTTGTAAAGTATGCACTGGCGACTTATGCAACTCCT
CCAACAAATCTACAGTAACTATTATATTACTGATAGCTAGCTTAAGCTTAGTTAAGTTTA
TTGTGTAGAATAGAGGTGGCTAATATAACCAATAACCAATAAATTTACCGGTAAAAAAAA
TTAACACTTCTATTCGATAAATAAAATTACCCAAAACGGTTAAAAATACCGTTTACCAAA
CACACTGCGTGTAGTGGCATAGGCAATTATTGGAAATTATATTTATGCAAGTTTCAACTT
TATTTCAACACGTAAGATTCATTTTCGCCTTGCAGATGTCTTCAACTTATCATGTAAAAA
ATATTGAATTTTATGATTTCATTGTATGCTCTATACCCCTCAAAATAAAGCACAATATTT
AAGTTGGTGTATTTTACAGTTAATGATAATTTTTTTCGTTAAAAAATTGAAATGAAACGA
TATTTTTACCGAACGCGAAGATGACGTGATTGGTTGATTTTTTAAACGTAATATTTTGTT
TGATACTTGACATTTTGGCGGCTCAGTGCATCTTTTCTATTATTTTGGTAAAGTTGTGTT
TTTGTATTTTAAGAGATTTGTACTTTGTGTTTGTGTGTTTTGACTTTGTTTTTGTGTGTT
TGAGACTTTGCTTACTTTGTTGTTGTGGATTTTTAAAGTGTATATCTAATTTAAAATGCC
GAAACGCAATGCAGAAATATGGGATCATTTCGAAAAGTGCTAGTACCATTCAAGTTTAAC
ATTAGCAAAATTAATTTTTCAACGAAAAGATTTACCGGTATTTTCAACCAATAAAAATAT
CGAGGAACCCTCCTGCTGAAAAAAAGGCAAAAATGGCAGACAGGACTAATGATAAAGAGC
CAACATGGGTGTTACAGGGCAAGAAATTACTGAAAGTCCGAGAATTCAAAGGAAAAGTAT
ATGTAGACATAAGAGAATTTTATGAAAAGAATGGTGAACTTTTACCAGGTAAAAAAGGGA
TAAGTCTCACTCCAGAACAATGGAGAAAATTGTTATCAGTAGGTGAAGAGGTTAATGAGA
CTGTTAGTTCCATGTGTTAATTGTTTTTTTTGTTAATAAATGCATTGATTATAATATTAA
AAAAAAAAAAA
(2771 bp)

- SilkBase 1999-2023 -