SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25460_g1_i2
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		multidrug_resistance_protein_homolog_49_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005919 C pleated septate junction
GO:0006810 P transport
GO:0006855 P xenobiotic transmembrane transport
GO:0008152 P metabolic process
GO:0008559 F ABC-type xenobiotic transporter activity
GO:0015562 F efflux transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0031427 P response to methotrexate
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042908 P xenobiotic transport
GO:0043190 C ATP-binding cassette (ABC) transporter complex
GO:0055085 P transmembrane transport
GO:0060857 P establishment of glial blood-brain barrier
Transcript
Level		FPKM:5.40 TPM:2.81
ORF EntryO_BomoMSG16315_5prime_partial:A_BomoMSG_c25460_g1_i2
Sequence
(Nucleotide)
GCTCTTCCGATCTCTTAGGTATTGAATCTTTGTTTATTACAAGATTTCAAGACGCACTGA
TAGACGCTTGTGCAGCTGTCGTGAAGAAGAGTCGTTGGCGGGGCTTAGTCCTTGGTTTGT
GTATTTACGTTCCACTGCTGTCTTACTGCAGCGCTGTCATTTATGGAGCAGTTCTAGTCG
CCCACGGGGAAGTCGAATACGAAGTTGTTTTACTTGTTACTGAAGCAGTGATGTACGGAG
CATACATGCTAGGTCAGTCATTAGTATACGCACCGAGCTTCAATTCGGCAAAAACTTGCG
GTGCAAGGATCTTATCTATTATAAACCGAGAGCCGAGAATCAGAACAGTAGACGGTCTCA
ACGATAAACAGGATTGGTCCGCATCAGGAAATTTCAGCATCAACGATGTCGAATTTAGTT
ATCCTACTCGAGCACATCAGATGATTCTCAAAGGTATTGACTTGCACGTAGAAGCCGGCA
AAACTGTTGCCCTTGTTGGTTCATCAGGCTGCGGAAAATCAACAGTGTTGCAACTTATAC
AGAGATTCTATGATCCCACAACTGGAAATATTGAATTGGACGGTGTGGATATAACGAAAA
GCTTAACACTGAATCGCCTCCGAAAACAACTTGGGGTGGTGCAACAAGAACCCATTTTGT
TCGATCGCACCCTCGCAGAGAACATCGCGTACGGTGACAACAGTCGCAAACCTACTATGG
ATGAAATCATTGCAGCAGCTAAAGCGGCCAATATACACAATTTCATCGTATCTTTACCAA
AGGGCTACGAAACGAACTTAGGAGCAGGCGGTGCTCAATTATCCGGAGGACAAAAGCAGC
GAGTGTGCATAGCGCGGGCCCTCATCAGATCACCACGCCTACTCCTCTTGGATGAGGCAA
CTTCGGCTTTGGATGCCAACAGTGAACGGGCTGTAACAGAGGCATTGGATCATGCAGCCA
AAGGCCGAACTTGCATTACTATAGCTCATCGTCTAACTACAATCAAGGACGCTGATATCA
TTTGTGTTTTGGATAAAGGTAAAATAGTAGAAAAAGGCAACCACGCAGAGCTCATTGGCC
TCAAGGGACATTACTGGCAACTAAGTAAACAGCAAAACGTCACGTGAAGAAATTTTAAAA
CAATTTTAATAGCATAAGAT
(1160 bp)

- SilkBase 1999-2023 -