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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25446_g1_i2
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		28S_ribosomal_protein_S29,_mitochondrial_isoform_X1_[Bombyx_mori]
Ontology
GO:0003735 F structural constituent of ribosome
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005761 C mitochondrial ribosome
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006915 P apoptotic process
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
GO:0044822 F RNA binding
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
Transcript
Level		FPKM:11.08 TPM:5.77
ORF EntryO_BomoMSG16282_3prime_partial:A_BomoMSG_c25446_g1_i2
Sequence
(Nucleotide)
GAAATAAAAAGAAGTTAGGTTATTTAGGTTATGTTATTGTTATTTTAAATATTTATTTAA
ATAAGTGCGTTTATAATGTTTACCCGTAACTGGAAGCATCTTTGTCGCCGCTATTCTCAG
GCAGTCACATTCAGAACAAGTGAAATCTATCCTGCTCAACACAATGAAAATCAAATAGGC
CTCTTCTATACTATAAAGCCAGACTTGTGCAAGCAGTTGTTCAATCATGGTGGCTTACCA
AAGAGTTTCATGAAGCAGACAAAGACATTCACTGAAACAGCCATAATGGTGCGACAGCCT
GCTTTGGATATAATGGATTGCATCAGAGCCTCGGATATGAACAAGCCAGTTATAAGATAT
GTACTCTATGGTGAAAAAGGTTCAGGTAAATCATTGACATTGGCCCACCTCCTACACTAT
GCACTTGAAGAAGGCTACCTTATTCTTCATGTTCCATGGGTGTCAGAATGGTTACGAAGA
ACTCCTCGTCATAAAGAAATGACCAATTCTCAGACAAAAGAAGGCTTTGTCGATCTTCCC
CTGGACGCCGCCGAGTGGCTGTTGCATTTCAAGACTCAGAATCAGGCATTGCTGAAAAAC
TGTGAGTTAAAAATCTCTAAAGATTATGAATGGAGCAAGCGAGAGAAGACCGAAGCTGGT
TCCCCCATAGCGGCACTCGTAGAGCACGGCATAAACAGAGTCAAATACGCTTGTGACGTC
ATCGATGCACTCCTCCTAGAGATCAAAATACTTTCTAACAGTAAACAATGCAAAACATTC
GTCGCTATTGACGGCTTCAACAGTTTCTACTATCCAATGACGCGACTGAACACGCCCACC
AAAAAGAAAATTAAGCCCGAAGAGGTGACACTGACCAATTCGTTTCTGGAGCTCACTAAA
AATGATTGGAACAATGGAGTTGTAGTATTAACAATAGATCAACTGGCTGTGCCAGATGAA
AACCAGGAGAGTTTCCTACCCAGATACTTGTTATACAAAAAGGGCTTTGAACATCTAGAC
(1020 bp)

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