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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25436_g1_i1
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		calpain-A_isoform_X5_[Bombyx_mori]
Ontology
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005509 F calcium ion binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006909 P phagocytosis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008340 P determination of adult lifespan
GO:0009953 P dorsal/ventral pattern formation
GO:0015629 C actin cytoskeleton
GO:0016540 P protein autoprocessing
GO:0016787 F hydrolase activity
GO:0021919 P BMP signaling pathway involved in spinal cord dorsal/ventral patterning
GO:0030036 P actin cytoskeleton organization
GO:0042335 P cuticle development
GO:0043025 C neuronal cell body
GO:0046872 F metal ion binding
GO:0050832 P defense response to fungus
Transcript
Level		FPKM:2.97 TPM:1.54
ORF EntryO_BomoMSG16227_5prime_partial:A_BomoMSG_c25436_g1_i1
Sequence
(Nucleotide)
TCTCGAATGAGTCGGTTGTATCACTGTCAGTTGAAAGGCCTGTGTTTTTGGGTACGGTCA
TATTATTATTAAAACTTAAAATTTCACGTAATTTAATATATTTTAATCCAAGATGTCTTA
GCGAACAATAAAGGAACTTAGTGAGTAGTAGTGAAAGTGCGCGAGCTTGCTATGGCAGGC
CAAAATGGCGGTGGGAATTTTGGCGCCCTTATACAGGGCGCGGGAAAACAGTTGCTTAAT
CAAGGAGGCCAGGCTCTACTGAATTATGGTGCTCAAGCCCTCGGGAACATCATTAATGAG
GTGTTCCAGAAGAAAGAGGTTGAACAGAAAAGGTTTCTGCCCAGTATCAAGAATTATAAA
GTGCTAGGCGAAACCCGCCCGTCATCATTCGGTCCGGCTACGTATCAGGACTTCAAAGAC
ATAAGATCGCGGTGCCTAGCTGAAGGTAGACTCTTCGAAGACCCCGAGTTTCCGGCCGTG
GACCGCAGCCTCTACTACAAGGAGAGCCTGGACAGGCCCATCACTTGGCTCAGACCTGGG
GAAATCAGCGACAACCCTCAACTTTTCGTCGAAGGCTACAGTCGCTTCGACGTCCAACAA
GGAGAGTTGGGCGATTGTTGGCTGTTGGCTGCCGTTGCCAACTTGACACTTCATCGCAAG
TTATTCTTCCAAGTTGTACCTGATGATCAGAGTTTCGATGAAGATTATGCGGGCGTCTTC
CATTTCCGTTTCTGGCAGTACGGGCGCTGGGTGGACGTGGTCATCGACGACCGTCTCCCA
ACGTACCGAGGGAAACTGGTGTTCCTCCACTCGGCCGAGGCGAACGAGTTCTGGAGTGCT
CTACTCGAGAAGGCATATGCGAAACTCCACGGATCGTACGAAGCCCTCAAGGGAGGCTCG
ACCTGCGAGGCCATGGAGGACTTCACCGGCGGCGTCACCGAAATGTACGAGATGTCCGAA
CTGCCGCCAAACTTCTACACGATCCTGCTGAAGGCGTACGAGAGGAACTCTCTTATGGGC
TGCAGTATTGAGCCCGACCCCCACATCCTCGAGGCGGAGACTCCGGCGGGGCTCATCCGG
GGGCACGCGTACTCCGTGACCCGGGTCAAGTACGTGGACATCGAGACGCCGGGCCGCGCC
GGCAAGATCCCGCTGCTCCGCCTGCGCAACCCCTGGGGGAACGAGGCCGAGTGGAACGGA
CCTTGGAGCGACAAGTCTCCAGAGTGGCGCTACATCCCGGAGTCGGAGAAGGAGGAGCTC
GGCCTGACGTTCGACGACGACGGCGAGTTCTGGATGTCGTTCAAGGACTTCGTCAACCAC
TTCTCGCGAGTGGAGATATGCAACTTGAACCCCGACTCTCTGGACCCCGAGGAGTGTCCC
GAGGGCTGCACCAAGAAGTGGGAGATGTCGGTCTTCGAAGGCGAATGGGTTAGAGGCGTG
ACGGCCGGCGGCTGCAGGAACTTCCTGGAGACGTTCTGGCGGAACCCTCAGTACACCGTC
ACGTTGAGCGACCCCGACGAAGGAGACGACGAGAACAAATGTACCATAATCGTGGCGCTG
ATGCAGAAGAACCGTCGCTCGCAGCGCCACCAGGGCCTGGAGTGCCTCACCATCGGGTTC
GCGGTGTACCGCCTCCCGGACTACGGGCACGTGCCCAAGCCGCTCGACGTCAACTTCTTC
AAGTACAACGCGTCCGTCGGCAGGTCGCAGGCCTTCATCAACTTGAGGGAGGTCAGCGCC
AGATTCAAGTTCGAGCCCGGCTCGTACGTGATAGTGCCCTCGACCTTCGACCCTGACGAG
GAGGGAGAGTTCTTACTAAGAGTCTTCTCCGAAAAGGACAACAATATGGCTGAGAATGAC
GAGGACATCGGTATGGGCGATGTTGACGACAGAGTGAAGGAGCTGGCGCCGGACCCGGAG
CCGGCCGACCCGGTCCGTGAGTTCTTCACGCGGCTCGCCGGCTCCGACGGGGAGGTCGAC
TGGCAGGAACTCAAGGAGATCTTGGACTACGCCATGAGGGAAGAACTTGCGATGCGGCAC
GGCGCATACGACGGGGGCGGCGGGGTCGCGGGCGGGGGGCCCTCCCCCCGGACCCCGCTC
GGCCCCCCCGGCGGAGATCGG
(2121 bp)

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