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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25416_g1_i2
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		DIS3-like_exonuclease_2_[Bombyx_mori]
Ontology
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000176 C nuclear exosome (RNase complex)
GO:0000177 C cytoplasmic exosome (RNase complex)
GO:0000287 F magnesium ion binding
GO:0000291 P nuclear-transcribed mRNA catabolic process, exonucleolytic
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004540 F ribonuclease activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0006364 P rRNA processing
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008266 F poly(U) RNA binding
GO:0008285 P negative regulation of cell population proliferation
GO:0010587 P miRNA catabolic process
GO:0016075 P rRNA catabolic process
GO:0016787 F hydrolase activity
GO:0019827 P stem cell population maintenance
GO:0034427 P nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0051306 P mitotic sister chromatid separation
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
GO:1990074 P polyuridylation-dependent mRNA catabolic process
Transcript
Level		FPKM:15.77 TPM:8.21
ORF EntryO_BomoMSG16174_complete:A_BomoMSG_c25416_g1_i2
Sequence
(Nucleotide)
TATAATTCTGTGTAAAATTATTGTAAATATTGAGGAGAAATGTAATCATTCACATTTATA
GACAAAAGCAGCAGGCTTGTAATACTCCATACCTGCTTATAAGTATTTTACAGTTTTTAT
TTTTTTGCGCCATGTCAAGCCATAACTCATTAAGAATGGATGCAGCATGCAGTGAACCAA
CAACATCGGTGGTCTCCACGTCGTCAGTACCACAAAAAACATCAAGTGACAAAGCAATAA
ATGAAAACAAAGTCGATTCACCTAAACGAACACCCAAAAAATCAAAAAAAAAACAAAGAT
CAGAAGTTACAGTACCTACCATGGTATTCAACAATTCATCAATTAACGATGTTTCCAATA
AGTGCCAGAATTTGCAAATTGAAAGCGACAGTGATAACGGGGAGACAGAACAGGTAACCC
CAACTACCCCGTCGAAAGGAAAAAACGCCAAGAAAAAGGAACGACTAAAAAAGTTGGAAA
TACCTACGGTACCAGTGAATAACTTTAACAACACAAACAGAGTACAAAATTCACAGTATT
TATTTAACTATTTTGGGTCTCCTAGAAATAGTACATTCTCTGTGCATGAATATTTTACCC
AACAGATTACACCATTGTATGCAAGTACCAGCTCTAGGTATTTAGAAAATCTGTGTCACC
ATCCACAATATCAATATATGCAGAATATCCAACACATGAGAGATATTTTACAAAGCCCAG
AGCATGTTGCTAGTGTACCTATCACTCCATTAATATTATCAGGACAGAGATCAGAACCTG
TTTGTATTCCAAATTCTACATTTATTCATTCTGAACCTAGCACTCCAAGGTTCATAGAGA
ATGCATTGCAACACCCCTTATTGAATCCATCATTTTCAAGACAAACTGGTACAATACAAA
TTGGACAGCTCAGACTGAGGCATAATTCAGAAAACAATTGCTTAACTAAAACTCTTGTAA
ATGGTGACAAGAAATTTGATGCATACCTTTCTGGAGAAGATGTTGAGAAAGGTTTAAAGA
ACAATATGCTTATTGAAGGTGTTCTGAGGATAAATCCAAAACAATATCAACATTCATATG
TTTCAAGTCAAGACCGGAGTCAACAAGATATATTAATAGACGGTATTAAGAATAGAAATC
GTGCAATGGAAGGAGATGTAGTAATAGTACAATTAGTTGAAAATGAACCTGAAGAAAACG
TTACTAATCCTGAACAAAAAAGAGGGAAAGTAGTTTTTATCAAGGAAAAAGTTCATACTA
GAACTTGTATTGGTTCACTCAAACTAATGCATGACAAAAATAGACAAAAAGCTATGTTCG
TGCCTCGAGATCACAGAGTACCAAGAATAAATATACCATTTACTTCATGGCCAGATAATT
TTTATGAAGATGCCAAGAAATATGAAAACACATTGTTTGTTGCAAAAATAATAGATTGGT
CTGATACAAGGTTTGCTGTAGGAAAAATTATGGGTAATATTGGTAAATCAGGAGACATGG
TCACTGAAACAAAAGCAATATTAGCAGAAAATGATTTAGATGTTACTGCTTTTGGCTCTG
AATACAAGGATTTGTATCCTCAACTTGACTTTACAATTCCCGATGAAGAAATAGCAAAGA
GAGAAGACTGTCGGATGTTATGTATCTTTAGTATTGATCCATTTAATTGCCGTGATATTG
ATGATGCAGTCTCTTGCAAGGAACTAGAAAATGGTAATTATGAGATCGGAGTCCATATTT
CTGATGTTACATATTTTTTAAATGAAAACACTCCGCTTGATGTGAAAGTTGCAGAAAAAG
CTACAACAATATATTTGGTAGAAACTGCTTACCACATGCTTCCAGATGATTTGTGTATGC
TTTGTTCTCTATTCCCTGGTGTAGATAAACTAGCTTTCTCTGTTTTTTGGGAAATGACCA
AGGATGCTAAAGTTATTAGTTACAGGTTTGCTAGGACTGTTATAAATTCATGCTGTCAGT
TGGCATATGAACATGCTCAAGATGTTCTTGATGACAAAGAGGATGCTCAAATAAAATTTC
CAGAAATGTACAATGGTTTTGATTACAAAGATGTGCACAAATCAATAAAAATTTTAGGCA
AATTGTCAAATATTCTTCGTGCAAATAGATTTGAGAATGGTGCATTGAGAATTGATCAAC
CTAAGGCTAGTTTTAGATTAAATCCTACTAGTGGTTTACCAGAGTCATACTGCATATATG
AGAGTAAAGAAAGCCATCAACTCATTGAGGAATTCATGTTGCTCGCTAACATGTCTGTAG
CTACACGTATTTATAGTGACCACCCAAAACTGGCATTTTTAAGGAGTCATCCACCACCAA
GTAAATATATGTTGATGCAGCTAGAAAAGTCTCTAAAACCAATGGGCATAAAATTAGATA
TCGAATCGGCTGGACATCTACACAGATCTTTACTACCATATGTGGGACCAGACAATACAG
ACAAAGGAAGAGCCATGGTTTTAAATTTGCTATGTGCAAAACCTATGACAAGAGCAAAAT
ATTTTTGTGCTGCTGCTTGTGATGATGATGAATTTCAACATTATGCTCTGAATGTGCCCC
TGTACACTCATTTCACAAGTCCTATTAGGAGATATGCTGACATTATGGTTCATAGGCTAT
TAGCAGCAAGCTTAAATTATAGAGAAACTCCAGCATGGCAGGAAGATGATGTACGCATGA
TAGCTGCTCAATGTAACAAACAGAAGTACAATGCTAAAAAGGCTGGTGAAATGTCAACAG
AATTGTACACTTTAAAGTACATTGAACTTAATTCTCCCATAGTCACTGAAGGTGCTGTGG
TTGACATTAGGGAGAAATATATTGATGTTATCATTGTTTCCATGGGCCTGAACCGGAGAA
TATTTTTCAATAATGATTTTCCTGGAGAGTATAAGTGTATTAGACACGAAGAACTTGCGA
AGTTGGCTCGAATGGAACTGAAATGGAAACCGGTGAATGAATTGCCAGAAACTAAACAAG
TAATTGGAGTTTTTTCCATTGTACAAGTTGAAATGCACAAAGGCGATGACATGGTAAAAA
TCGAAACTAAATTAGTGCGACCCCAATAGTTTACATTATATTATTTTACTGGTTTTTTTA
TGACGACGACAACCAGACGAGAGATC
(3146 bp)

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