SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25384_g1_i3
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		phosphatidate_phosphatase_LPIN2_isoform_X3_[Bombyx_mori]
Ontology
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008195 F phosphatidate phosphatase activity
GO:0009062 P fatty acid catabolic process
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0019432 P triglyceride biosynthetic process
GO:0045944 P positive regulation of transcription by RNA polymerase II
Transcript
Level		FPKM:0.48 TPM:0.25
ORF EntryO_BomoMSG16067_5prime_partial:A_BomoMSG_c25384_g1_i3
Sequence
(Nucleotide)
CTCCTCGCCCGCTTCCCCCGCCTCGCCCGCCGAGCCGCTCAGCTCCGACGAGGAGCGGCC
CAGCCGGCGTGGCGTGCTCAGCGGCATGTTCCGCTTCATGTCGACGCGGGACTCTGCCGA
CAACGCGCCCGAGGGGATCTACCTGGACGACCTGGACCGTGGTCAGGTCAACCCCGACCT
GTACTTCCCGAAATATCATGCTGAACGTCATCGTGGCAGCTCGGTGGTGCAGCACGCGCG
CGCCGCTCCCACGGAGGAGGAGTACGAGTCCGGGAACGGCCCGTCCCTGCCGCAGTCGCC
AGCCTCGCTCGAACCGCCCGTCATGGACTCGGACGACGACGACAAAATCTTAGCAAAGGG
TCAAGTGTGTCTGTACGTGCGCGAGGACAACGTGTCCCGCGCGCTGCCCTTCGAGGAGTT
CTGCTCCGACGGCGCCCGACTGGCGGCGGAGGGCCGGCTGCTGGTGCGGCTCGGCGACCG
CTGGATGCCGTGGCGCAGCGCGGGGCCGCTCATCCTGTCCCTGCTCGTGTACCGCCGGCC
TTTGCCAAACCGCGTCTTGGAGTCGCTAGAGAAAGGTTCGGAGAAGGAAGAGGCGGACGC
GGCGAGCTCGCACCGCGGAGACAGCGGCAGCAAGCCCCGCGCCTACTCCTGGTGGAGCTG
GAGGCGGACGTCCGAGGCTAAACATGCCGAAAAGACTTCTCTATCGGACGACATTCCAAC
AAAGTCGAGTCCACCACAATCCGAAGCCGTAGACACTGTTGCACTCCAAGAGACGCCTGC
GGAAGAATCGACTGTGGAAACAATCGAAGAGACACAAAACATTGTAAACGTTGATGACGT
GTTCGAATCTCAGCCCGTCGAAGTGGAGGAAAACATACTTACGATGTCAGAAAACGCTGT
CCACCAAGAACAAGCAATGGATCACCAAGACCAGAGTTCATCGGATTCGGATCAAGAGCA
GCAGCTGCCCAGGTCGTCGAGGGCGCGCCGCCACTCGACCTTCCGGAAGACCCTTCGTTT
GTCATCAGAACAGATTAGAAACTTGAACCTCCGCGAGGGCATGAACGAGATGGTGTTCAG
CGTGACCACGGCGTACCAGGGCACCACGCGCTGCAAGTGCAACGTGTTCCGCTGGCGATA
CGACGACAAGGTCGTCATCTCCGACATCGACGGAACCATCACCAAATCGGACGTACTGGG
CCATATATTCCCAATGGTTGGCAAAGATTGGGCCCAGTCTGGGGTCGCTCAACTATTCAC
GAAGATAAAGAACAACGGATATCAACTGCTCTATCTGTCGGCCAGGGCTATCGGACAAGC
CAAAGTGACTCGGGAATATCTGCGCTCAATCAGACAAGGCGAGGTGTGTCTACCGGACGG
GCCGCTGCTGCTGAACCCTACGTCGTTGCTTCGCGCCTTCCATCGAGAGGTCATCGAGAA
GAAACCAGAAGAATTCAAAATTCAGTGCCTCGCCGATATCAAGGCGCTGTTCCCTCAAGG
GTCTAATCCATTTTACGCTGGCTATGGGAATAGAGTGAATGTAAGTTATTGTACATTTAA
AGGAAATCATTACAAACCGTATAACATAAATGAGGC
(1596 bp)

- SilkBase 1999-2023 -