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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25317_g1_i1
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_BRCA1-associated_RING_domain_protein_1-like_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031436 C BRCA1-BARD1 complex
GO:0042325 P regulation of phosphorylation
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0043066 P negative regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0046826 P negative regulation of protein export from nucleus
GO:0046872 F metal ion binding
GO:0046982 F protein heterodimerization activity
GO:0070531 C BRCA1-A complex
GO:0085020 P protein K6-linked ubiquitination
Transcript
Level		FPKM:3.76 TPM:1.96
ORF EntryO_BomoMSG15890_5prime_partial:A_BomoMSG_c25317_g1_i1
Sequence
(Nucleotide)
CTTAAAAGCATTGGACGCAGTCAAAGAAGATTACACTTGCGGCGTCTGTTCAGAACTCTG
TAAAAATCCAGTGACTTTGAGTAAATGTTTTCATTTGATATGCGCTAGTCACTTCGAGGG
CTTGGACGCTTGTCCGACCTGCGGGACGAATTTAGAAGGTTGCAAAACCTTCACCGACGA
ACGTCTTGCCGTATGCATAAACTCGGCGAATAAATTAGACGAGATATTCAGTTGTTTTAG
ATCTAAAGAAACGTCTACGACAAAACAAGATAAAATCGAATCTAACAGTAAAACCACGTT
AACAGATGTCCGAAAACCTCAGGCAAAGCTCCGAAGCCACGATATTTCAATAGCCAGCAG
TAAATTCAGCAAGTCCAGTGAAAAACGCAATAATAAAGGTGAAACGCCACTACACATCGC
CTGCAGGTTAGGTAAAGTTGACAAAATCACCGAACTATTAAACCAGGGCGTCAATACGAA
CACTAAAGACAATGCCGGTTGGACGCCTTTACATGAAGTTGTTCAAAATGGACGACTCGA
CTTGGTCACTCTTTTACTCCAATATAACACTTTAATTGACGTGCCGGGGCTCAATAATGA
GACACCATTGCATGAAGCAGTCAGATACGGACACCGAGAAATCATTGAAGAACTTGTCAA
ACATGGAGCGGACATAAACTGTAGGAATTCTAAAGGGGAAACTCCACTGCAGCTAGCTAC
AGATGACTTGAAAATAATATTAAAGAAGGCATCAGAGAGTTTGATTCAAACACAGTCCGT
TAATGTGACTCACATGTCGATCTTGCACTCAGAGTTAGATTTTGATGATATAAGAGTCTA
TTGTGTATCTCAGCAGAAGTCGGTTGTATCAAAACTAAAATTGCTTTGTAAACAACACAG
CAATTTGCATATTGAAGTCAAATTTACAAAAAAAGTAACACATTTGATCGTTGATGCCGA
GAATGGTATATGTATGTCGACAATAGATGTACTGCAGGGGATCGTGAATTCCATATGGAT
ATTAACGTCAGATTGGGTCCTGAAATCTACAGAAGATAGTTTGGAACAGTTTGAACAATT
TGAGGTTACTGGAGTGGGTACAGCATCCTACAACGGTCCTAAAACAGCTCGTTATAACAA
ATACAAGCAACTACCAGGAGTGTTTGATGGCTGCCACTTCTATCTACACAATTTCAATAT
GAAATACGAAATATCCAAGCACCTGGTGCTGACCAAAGCGACTATAAGCAAGCTGATTAC
TGATGCAGGCGGTATAGTGCTCAGGAGAGTGCCCAACCCGGAATCCATACCGGACCAAGA
GAAATTGGTGCCGTATCATGCTAAAAAAGATGGAAAACTATATATTTGTTCGCATTATAT
AATTTTTAAAGACACGTACCAGCCAATGTATAATATGCAGCATCTTAAAGCGCTGCCAAT
AGGCTGGTTGATTGAGTGCATAGAGAGATATGAACTGTGTGATCCGTGATAGAGATCGGA
ACTTGTTCCTTGAAAGCAACAAAACTGATAATCTATATATTAATATGTGAAGCAAAAACT
TTGTACACCTTTTTACGAAAATTGCGTGGAAAATCCTCCGTATGAATTTTCCCACACTTA
CAGAGAATATAGGGAAGAAGTGCAG
(1645 bp)

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