SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25280_g1_i3
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		probable_protein_phosphatase_2C_T23F11.1_isoform_X2_[Bombyx_mori]
Ontology
GO:0003824 F catalytic activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0006470 P protein dephosphorylation
GO:0016787 F hydrolase activity
GO:0030517 P negative regulation of axon extension
GO:0031625 F ubiquitin protein ligase binding
GO:0043169 F cation binding
GO:0046872 F metal ion binding
GO:0048786 C presynaptic active zone
GO:0051965 P positive regulation of synapse assembly
Transcript
Level		FPKM:0.67 TPM:0.35
ORF EntryO_BomoMSG15820_complete:A_BomoMSG_c25280_g1_i3
Sequence
(Nucleotide)
AGATCGGAAGAGCGTCTATGGGGCAAACCCTTTCTGAGCCTGTGACAGAGAAGCAGTCAG
CAACATGTCAAGATTCAAGGTTCTTGGTCGGATCATCATGCATGCAAGGCTGGCGAGTGT
CCATGGATGACTCACACACACATATACTGTCACTACCTGATGATCCGGGCACTGCATTTT
TTGCAGTCTACGATGGTCATGGAGGTTCAAACATAGCAGAACATGCTGGGAAACATTTAC
ATAAGTATATAACAGCACGACCCGAGTACCACCTTGGTAACATTGAAGAGGCATTGAAAC
AGGGTTTTCTAGATCTAGATCGAGCAATGCTAGAAGAAGATATGTTGCAAGAAAAGGTTG
CAGGCAGTACAGCAGTGGTGGTGCTTATCAAGGACAACACATTGTACTGCGCTAATGTAG
GCGACTCCAGAGCCGTGGCTAGTGTCAGGGGTGTGGTGGAGACACTGTCATATGACCACA
AGCCCAACAACGAAGAGGAGCTACGTAGGATCATAGCTGGTGGTGGTTGGGTCCAGTTGA
ATCGTGTGAATGGTAATCTCGCATTGTCTCGAGCCTTGGGAGACTACGTGTTCAAGAGGA
ATTATAGATTATCCCCTCAAGAGCAGATTGTTACTGCTTATCCCGACGTGCAAGTGCGTC
ATGTAAACGAAGACTGGGAGTTTATCGTCATAGCCTGTGACGGTATTTGGGAAGTTCTCA
CTAATGAGGAGGTGATATCTTTTTGTCGAGTTCGATTGCTGAGCGGCTGGGAGCCGGCCG
CGGTCTGCGAGGCGTTAATGCAGCGATGTTTAGCGCCGAACTGCGCGACGGGCGGCCTCG
GCTGCGACAACATGACCGTGGTCATTGTCTGTCTGTCGCCGTTCCCGAGGGGGGCGCCAC
ATTGTCCGTATCAGTACTTGGACACGTCGCTACAAGCGACACCTGCAAGCTATTGGAGCT
TCACCCCGTCCCGGCGATTCTCTTAATGATACAATTGCACGAAATAAATATCTAGACTAA
ACACAAAATGATTGTACTATGTACTTTGATATAAAAAAAATCGCCTAAATGAAAACCAAG
ATTTAACTGTACAGACCTATGTCTTGACTGTGATACTTTTTTTTAAACAAATAATAATTT
AAGGAAAAAGAAAAAAAAAATATATTGCTACTTCAAAACTCGCAGAGCACACAATCATTG
GCGAATATTTAATAAATAAAAATTAAATAATACAAAAAAATATATATAATAAAGAAAACA
TGTACACAGTATAACTAACATTTTTGTGTTTATGTCGCCACCTGCATGCACAAGCTTAAT
TTAACATTTTTGTTTCTGTACTGTGATTGTTTGTTATTGTCATTTGGTTGCTTTGTGGAA
TATATATATAAGAAAATTATATCGACGATCCCCAAGAATGAAGTCGCATCTGCAAATTTT
ATGATTTACGTACTACATGGAGCTTGGAAGTTCGTTATGAAAAGCATGTTTTAAGAATTT
TGTTTTAAATTTAAAGTCAAATTTGAGATTAATTTAATCGATATAACTACACAAAGTATA
GACGCAATGTTTTCATATTTTTCTATGTTCATGCTGCAGATTGAATGCACAGATACAAAC
ATTAAATTTTGAATCTTTTTCTTCAAATGATACTGTTATTAAAATGGATTGTAAATTGAA
TAGACAAAGAACCCGTCCAGCTCCTAAATTGTTTTATTCATTTTATTCAAATAATTAAAA
TAGTTTTTGGTTAATTTTATCAAATCCATAGTTCTTGGGTACCGTTACCTATTTTTTAAG
GTAAATAAAATACAGACATTAATTTTTATAACTATTAAAATTATCTGTTATAGAATAATA
AAATTAAGCCGGTGATGGCAACATTCATTATTAGAATCAACAATAATTTATAAAAAGATA
GTGGGTTCGTACTTTCATAACATTATTTTTGGGTGTTTATACATTTTTAATAGTACATTA
AGATGTTTATTTGAAACTTTGTAAGACTGAGGAGTGCCATGGGAATGACGGTGTTGCCGT
TATGAAATATTAAAAAAATAAGTACTCACCATGATTCCATTGTGTCGTATTAATGATATA
AAAAAATAAAGTTGTGCTATTCACAAAACGGTACTAGTGCATGTTACTATTTCCATTGCA
TGATGTATAACACTTTTAGCTTGCTAACTGTTTTTTTCGATGCGCAAACTACATCCAACA
AATGAGAAAATAGAGGGGGG
(2240 bp)

- SilkBase 1999-2023 -