SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25271_g2_i2
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		uncharacterized_protein_LOC101746153_isoform_X1_[Bombyx_mori]
Ontology
GO:0000077 P DNA damage checkpoint signaling
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000781 C chromosome, telomeric region
GO:0001102 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001104 F transcription coregulator activity
GO:0002039 F p53 binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0016925 P protein sumoylation
GO:0035064 F methylated histone binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051091 P positive regulation of DNA-binding transcription factor activity
GO:0071481 P cellular response to X-ray
Transcript
Level		FPKM:3.96 TPM:2.06
ORF EntryO_BomoMSG15794_complete:A_BomoMSG_c25271_g2_i2
Sequence
(Nucleotide)
CGTGTGCTCTTCCGATCTGGGGTCGACGACCTATGGCGGCGAAGACGAAGCGAGCAGTAC
TGCCAACTCAGCCAGAAGAAGCAGAGTTTATGTACGATATGAATTCCCCGGAAATGGTAC
CCAGCAACGGGGACGGAGGACATTCACCAAAATCGCCTAAAGACGAGAAACCGCTGTCCT
CTATGGTCGCGACTCCGAAATCCGTGAGCAAACTGAAGCAGAAACGTCGACCGAACTCCC
CACGACCAGCGACTCCTGTAGATAAAATGATGAAACAAGAATACCCCGGTCACGCCCCGG
ATACAGTGGTGTTGGCGAAGTGGGTGGACAAACGGTATTATTCCGGCAAAGTAGTCGAGA
TAACAGATTTGAACAAATATTTGATCAAATTCGACGATGGTCAAACGAAGGTTCTACTGG
ACGATTTCATTATCTTTGGGGACATGAAGACTCTGCCTCTTACCGGACAGCTGGTGTATG
CTGTGGTCGACGAAGAACAGAACTACGAACCGGGCTTGGTTCTTGGCGTCGAAGAAAACG
ACAGTGGCACCATTACATACAAGTGTGCCACAAATGGTGACACCCTAGTCGTGGTAACAG
CCAGCGAACTGTATCTAACGGAGGAACAAGCCAGAGCTCTGAAGGATGCCGGCAGACCAC
GGTCACCGACCACTCCTAACACGACCCCTCGCAGGAGAAACCACAGAGAATTGGACTTGG
ATAATATTATTCAGGGCCCGCGGAGTGCTCGCAGCAGAGACAAAGGAAGCTCAAGCGCCA
GGAAACGAGTGGCTTCACCTAAGAGTCCTAAAGCCTCTACGTCAGGTTTGAAAACGAAAA
TCGCTGTAGCCGGTAGGAAACGCGTCGCCAGCGAAAGCAGCGAGATCAGTGAAAGCAGCA
ACTCCGCTCCGAGCACGACCAGACTCGAGGAAGTAGCGGGAGTGGAGCCTGAACTACAGC
GAACTCCGAGAAAAATTGATGGTGTCAAAGCGGGCCCGTTCCAGCTGAAAGGGGCCGCGA
AACAGAACATCGGTAAGAAGAACTCGAAGCTGACCAAGTTCGAGAACGACGCCGACACCG
TCTCTCAGCTCGGCCCGATACCGGACGGCGACCACAAGATCTTCAAGGGAATGTACTTCT
TGCTGACCTGCGCGGCCACCTCCAAGCGATCCCGAGTGGACAAGGAAAAAGAAAGAGATA
AGAAGAAAGAAAAGGAGAGGGCTGATAACTCAACGGACGCCAGACAATATTCCTCGGAGG
AAGACAGCGAGGCTCCGTCCACTGTGGGCACTGATACAGAGGACTTTGAGTTCTCTACAA
GACCATTCAACAAGGAACGGTTGAAGGAACAGCTGGAAGCCGGAGGAGGCGTAGTGTATA
GTCACTTCGACGAGATACCCAAGAACAAATATGCGGTTTGTAAGCTAATAGCTCCCAGGC
CATGTCTCACCGCGAAATACATACAATGCCTGGCCAGTGACGTTAGAGCCGTGCTACATG
ACTGGGTCATTGCAAGTTGCTCCAGAAAGATCTTACCTGACGTCGATGCCCACGCGCTGC
CCGCCGGGCTTTCAGTTCTACACAGACGCTACATCACATGGGACCCGCCGGGCGAAAGGC
GAAACGCTACTTTCTTCAAGGACAAAATCATTCTTCTGTGCGGCGATCAGGACACGTTCG
TTAAATTCTGGGAACGTGTGTGCAACCTGACCGGGGCGACCACGCGCGTCGTCAACGAGG
AGGACCTCAACATGACCGGCGCGTTCGTCCTGGTCACCGATTGGGAATGTCCACATGAAG
TGCAGAACAAAGCCAACCAGGACGGCATACCTCTGGTCTCGACACACTGGGTCATCGAGT
GTCTCATCCAGGCCGAGATCGTTGACCCCACCTGTCACGATTCGTTTTCATTTATGTATA
CGGAGCCAGAATGATCGTGGGACTTCAGAAAGTACCTCATAATACGTGAAAATTGACACT
TGAGGTGATTCTGTGAGTTTGTGCGTTTCTATAAATAGCTACTATGAAAAACATAAAATA
CTATAGTGATATGCGAGAAGTATCGGTGATCGTTTTCAATAGAAAAGTGTCGAAGAGATT
TTGTGTGACCAAACGGTAAACTTAGATTAGGAACAGA
(2137 bp)

- SilkBase 1999-2023 -