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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25246_g1_i1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		ATP-dependent_RNA_helicase_DDX42_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0008104 P protein localization
GO:0010501 P RNA secondary structure unwinding
GO:0015030 C Cajal body
GO:0016020 C membrane
GO:0016607 C nuclear speck
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
Transcript
Level		FPKM:4.99 TPM:2.59
ORF EntryO_BomoMSG15721_3prime_partial:A_BomoMSG_c25246_g1_i1
Sequence
(Nucleotide)
CAATATTTATGATATACAGGAGACACATAACCTTATAAATTGGCTTGAACACTTTTCTTG
ACTTGAACAATTTTAATTTTGTGATTAAATAAATATCGCAATGAGTTATCCGGGCGGTGG
TGGTAGAGGAATGGGGTTTGCCGGCTTCTCGATGCCGAAGCGAAACCCTTCGAATGTGTC
TCTCCATGCTGTGCCGCCTCCAACGACGTCTATGCATGCTGTCCCACCGCCTTCCAGTGG
TCTTTCAAAACAAGGATATTCTACAATGAGTGCTATTACACAAAATGCTGTAACTGGCAC
ATGGGGTACTCTTGGGAAGAAACGCGCCAAAACCGAGGATGAGTATTTTGATGATGATGA
TGAACCTCCAACACCAGCGTTGGCTTATATACCTGCACCAGGAAGCCCTACTAATGCAGC
AAGCAGTTCTAGGGCTGATGATGATGATGAAGATCCTCTAGATGCCTACATGGCTGGGTT
GGAACAACAGGCAGCTCGGGATTTGGTCACCAGTAAGGAGAATGCAGCCAGCGGAAAAGA
CAGTGTGAGAGGTACTAGGGGTGATATTGATGATATGGATGATGAAGAGAGTTATTATAA
GTATATGGAAGAAAATCCTCTGAATAATGCAGATGACACATCTGATGTAGAAATAGAATA
TGATGAAGATGGCAATCCTTTAGCTCCAGCGAAGAAAAAGTTCATCGATCCCTTACCTCC
TATAGACCACTCTGAGATAGACTATGAACCATTTGAAAAGAACTTCTACACTCCTCATGA
AGATATTGAAAAGCTCACACATCAACAAGTTGAGGAATTAAAAAAGAATTTAGGTGTGAA
GATAACGGGTCCGGATCCCCCTCGGCCCGTGAGCAGCTTCGCTCACCTCGGGTTCGACGA
GCAGCTGATGCGCGCCATCCGCCGCTCGGAGTACACGCAGCCCACGCCCGTGCAGGCCGC
CGGCGTGCCCGCCGCCTTGTCCGGACGAGACATTATAGGTATTGCCAGAACCGGCTCAGG
CAAGACGTGCGCGTTTCTGTGGCCGCTACTGGTTCACATCATGGATCAGAAGGAATTGGC
GCCCGGCGATGGACCAATAGGACTCATCCTTGCTCCCACCAGAGAATTAGCTCAACAGAT
TTACATGGAAGCGAAGAAATTCGGCAAAGTGTACAACATAAGGTGTGTGTGCTGTTACGG
TGGTGGATCGAAATGGGAACAAGTTAAAGCGTTGGAAGGTGGTGGTGCAGAAATAATAGT
AGGCACTCCGGGTCGTGTCATAGATTTGGTCAAGTGTAAAGCTACAAATCTACAAAGGGT
GACCTATCTAGTGCTCGACGAGGCTGACAGAATGTTTGATATGGGATTTGAGCCACAAGT
CCGTTCGATCTGCAACCACGTGCGGCCGGAGCGACAGGCGCTGCTGTTCTCCGCGACCTT
CCCGCGCCGCGTGGAGCGACTGGCACGCGACGCGCTGCACGACCCCGTCCGCGTGCAGCA
CGGCGCCGCGGGGGAGTCGGCGCACCTCGTCACGCA
(1536 bp)

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