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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25208_g1_i1
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		ubiquitin_carboxyl-terminal_hydrolase_20_isoform_X2_[Bombyx_mori]
Ontology
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006897 P endocytosis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0008277 P regulation of G protein-coupled receptor signaling pathway
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0021551 P central nervous system morphogenesis
GO:0036459 F thiol-dependent deubiquitinase
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0070536 P protein K63-linked deubiquitination
GO:0071108 P protein K48-linked deubiquitination
Transcript
Level		FPKM:7.30 TPM:3.80
ORF EntryO_BomoMSG15643_3prime_partial:A_BomoMSG_c25208_g1_i1
Sequence
(Nucleotide)
GATCAACGATACGATTATTGTAAAATTTCTGTAATCTAATTCAATTAATTCCATTCCATA
AAAATGTTTCCTGTAAGACTAAGTTTATTTTTTCCTATTTATTCCTATGGAAAACTAAAC
ATAGCATCAATTTCTGCCTTCGCATAAAATTCTCTTTATTTACAAGGCTATTGTGAAGAG
TCAATCTTTTTATTTACGTGTGTTTGTATTTTTTATTCAAAATGGAAAAAGGAATGACAT
GCGAACATTTAAACAAACTGGTCCACGTACTCGGGAAAGAATTATGGCAGTCAAAAGAGG
CTTTGACATGTTTCGACTGTGGCTGTCCCGGCCCGAACTTATGGATCTGCCTGCAGCCTG
AGTGTCATCATGTTGGCTGCTCTGAAGTAAAAAATGATCACAGTACATTCCACCACAAGA
ATTTCGCCACACATTGCGTTCACATGAATGTTTCAACTGAAAGAATATGGTGTTATTCAT
GCGAAAAAGAAGTGCACATAAGAGCTGCTATGGCCCATTCAGCTAGTCCAGATTCGACAA
CAGCAGATGGATCGGTGAGGATTGGTTCTGTTGGCCTATATGCTGATGATGATGTGGATC
CTGATGAAATGGAATACGACGAGGACAGTAGACCTAGAGGTCTAGTGGGGCTCCAAAACA
TGGGTAACACGTGTTACATGAACGCGGCGCTACAAGCCCTGAGCCACACCGCGCCTCTGA
CGTCATACTTCCTGGAGTGCGCCGCTGCCGTCAACATACTCGCCGGAGACAAGAAACCAG
GCATTAGCCGAGCATACCAAAAATTAATTCAAGAAATGTGGAGTAGAAAATCTAGAGGCT
ACGTTGTACCTAACGGAATCCTGTATGGTATTAGAAATGTCCACCCGATGTTTCGTGGAT
ACCACCAACACGACACGCAGGAGTTCTTGCGCTGCTTCATGGATCAGCTACACGAAGAAC
TAAAAGAACCGATATATAATTGTACACCAAATGATAAGCTCGACTCGGAAGCTGACGGTG
ACCACCACGGGAACAGAAAGATACACGTGCGTCGTAGGGCCGCGTCATCGGGAGCAAGTG
ACGCGCCTTTCTTCGCGAGGATGAGGCGGAAATCGCCGGCCCCCGCCTCGTACAACGACT
CCGCTGCAGACGGATATTATAGAATACATAATCAAGAAACAGCCGGTACAAGACACAAGA
GATCTGCCAGTTTCGCCGGCATGCACCAGTTCACGTACAACGCTCACACGCAGCAACTTA
ATGGCCCAACGTCAAATCAAAGAGACGTAGGTTCAGAATCGGAATTATCGTGTTCGAGTG
AACCCGAAGAGCGGTACGAGACTTGTTCGAGCGGCGCTAGTGACGCGCCCGACTCCAAGG
ATAGAGAGAACACAAAAAGCGGTTCATCAGGCGACGGCAGCAACGTGAAGTACCGAAGCA
TCATATCCGACGTGTTCGACGGGAAGTTACTATCAGCCGTTCAGTGCCTAATATGTGACA
GGGTATCAACGAGAATAGAAACATTCCAAGACTTGTCGCTGCCGATCCCGTCCCGGGAAC
ACTTGGCCGTGCTGCGCTGCCAGCAGCCCATGCTGAACCACCACGCGGCCCACAACGCAC
AGGAATCCTGGAGATCGGA
(1639 bp)

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