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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25174_g8_i1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		sequestosome-1_isoform_X2_[Bombyx_mori]
Ontology
GO:0000407 C phagophore assembly site
GO:0000932 C P-body
GO:0001934 P positive regulation of protein phosphorylation
GO:0002376 P immune system process
GO:0005080 F protein kinase C binding
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005776 C autophagosome
GO:0005783 C endoplasmic reticulum
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006914 P autophagy
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0016234 C inclusion body
GO:0016235 C aggresome
GO:0016236 P macroautophagy
GO:0016239 P positive regulation of macroautophagy
GO:0016605 C PML body
GO:0019901 F protein kinase binding
GO:0030154 P cell differentiation
GO:0031410 C cytoplasmic vesicle
GO:0031625 F ubiquitin protein ligase binding
GO:0042169 F SH2 domain binding
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043122 P regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043130 F ubiquitin binding
GO:0044130 P obsolete negative regulation of growth of symbiont in host
GO:0044753 C amphisome
GO:0044754 C autolysosome
GO:0046872 F metal ion binding
GO:0051291 P protein heterooligomerization
GO:0061635 P regulation of protein complex stability
GO:0070062 C extracellular exosome
GO:0070530 F K63-linked polyubiquitin modification-dependent protein binding
GO:0097225 C sperm midpiece
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
Transcript
Level		FPKM:36.07 TPM:18.76
ORF EntryO_BomoMSG15541_complete:A_BomoMSG_c25174_g8_i1
Sequence
(Nucleotide)
ATTGCACAACAAAATATTGTTTTTCTGTATCGTTCTCTAACATTCGAAAATACGTGAATC
ATAATTCATAGTGCTTGCATAAAAGTATATAAAAAGTAATTCAAAGCCTCAAGAACACCA
TTAATTAGTTGTAACGCCGGTATTAATACGTGTTATTTGTGTCATTTTACGGCCAGTGCA
TTTATATAAATCAAAAATGGAGGACCAAGTTCCATTTAAAGTTTATGCATTTTTTGAGGA
GAATGCTCAGCCAGAAGTAAGGAGATTTGGTGTTGAGAAAACTGTTGTGAGCAGTTTTCA
TTATTTGAATGCGAAACTGCAAGAAGTCTACCCAAAGCTGCGGAACAAGATTTATAAAGT
ATCATGGAAAGATGAGGAAGGTGATGACATTATAATTTCATCAGATGATGAAATGATGAC
TGCACTAGTGTCTTTGGAGAGTGGGCTGATTAAGCTCAACGTTCACTGCAAGAATCCAGA
TATTAGAGATGATGACTGTGAAATAGAGATAACTGCGACTACAATGTTCCCAGAAAACAC
GGATGGTAACACGGCAGTTCATAGCGGAGTCGTTTGCAATGTATGCAACTCTCCAGTTGT
GGGTTTCCGTTACAAGTGCGCAATTTGTCATGACTACGACTTGTGCTCCAAGTGCGAGGC
CGCCGGGAATCACAATGAACACTGCATGGTCCGTCTCCCCACACCGGACATGTCGCGCAC
CTTGATCAAGGCGGCAATTAAGAGATCCCGTCATATTTTCAAATCGGTTGCTACCCACGT
CGACCAATGCCCTTACAAAAAGAATAGACGTGAACGTAGCGGGGACGCAAAACGCCGTGA
AGAAACTAATGGGGTTAAAGCGGAAAGGTCAGAGCGTGAACACCAGCGTCGCTCTCGGCC
GAGCTGGCTGGACACCTTCACCACATACATGAACGAGTTTACCAACCTCGTTGGAGATAT
TGGTCTCGATATGGATATTTCCACCGAGCACCCTCCTCCGAAGACTCCCAAGCCAACTTC
CGAGTACCAAAGTACTTCTCAGGAAGTTCCTCATCCTCAAAATACTGATCAAGCTTCCGA
GACACCAAAGGCTTCTGAGGCAGCCTCACTGAACCGAAATCCTTCCCAGCAGACCCCTCA
ATCCCAGAATGCCTCACAGAAATGCCCTCCAAACACAACTGCCACTGCTCCGCTATTCGA
TAATGGGGGAACTTCAGGACCCAAAATTCAATTCGATGTTAATCAAGAACCTGATCCTAA
AGTGCTGGATGATCTGCAAAAGGTACTTAACATAATACGCACTAAGTATATCGAACCCCA
CAACAATGCCAAGTTACAAAACCCGTCTACCTCTGCTAATGATCAGCCTCAAGCATCAGG
CGAGGATTCCGACAAGCCCGCTACTAGCCAAGCTCAGGGAGGAGAGGGAGACGCTAATAT
TGCGATCGATGTGGATAAAACTGATGCGAAATCTGTAAACTCGGACAGTTCTGATTCTTC
TGGGCAAGACAAAGAGGCTTCCTCCGACAAGGTTGACGATTGGACTATGGTGAACAAAGA
TTTGATGGATTCGAGTGCTAACGAGCACATCATGGATGTACCAGTGGCTCCGATTGGATT
TAATCTGCCCAAAGAGTTCCAGCAGCGGGTCACTATTGGACAACTTCTGTACCCGCAACT
TAATACCGCTACAGCTGTGCTGAAACCTAAAGAAGTGGAGCGTCCCAAGGAGTTCCAACC
AGTCGCTGCCCAGAGACAAGACAACCAGCAGTCGACTCAGAAGCCAGCAACTGCTCCCCC
AAATCCAGCAACTGCTCCTCCAAAGTCGGCGACACCTCAACCCACACCAATGCAGCAACA
AGTGACTCCGCCACGATTCCACCACGCTAAGCCACATATCGATGAGGCACTGCGTCAAAT
GCTGGCGATGGGCTTCACTAACCAGGGGGGCTGGCTGGTCGAGCTCCTGGAGAAGAAGGA
CGGCAACATCGCTGCTGTACTCGACTTACTCACTCCGGTTAATCCCAAGATTTAAAGAAT
CATTTCCATACTATATATCTATACTTGATAATCGACATTAAGTAACAATAGCTATGAAAC
AATCATTTTTGAATCAGTACAATTATTAACTTCAGTTTCAGCTATGTATGTAACACATTA
TCATATCTAAGTTGTTTCAAGTAAAAAATAATTTAACAGTGGCATTTGACTTTTGTTTAA
CAATAACTATTATTGTTTTTTCATTAATAGTAGAGATGTGATTAATATTCATATAGTAAT
GCGTAATAAAAAAGATACTTATTAAGCACCGACATTGGTACTGCCGATGTTTCATGATCG
ACAGTGCCCACTTTACGTCAGGCAGGCGTACTTGTCTGCCTCTTGGGACAAAAATATAAA
ACTTGTCCATCTGGATAAATCTGCTAAATGCAGAATAAATTTTAATTATACCAATAAAAA
AACATTTACTCAAAAGAAGTCTGCAAACAGTACTTTAAAATTAGAATTTCGTGTTTTACT
ATTTGAGTAGACTGGTCTGTTGTTAATGAATTACCAACATCTCTATGACATCACTATGAC
AGTTTGCAGCATGCAAATATTTTTGTTAAAATTTACTTGAACCTGACCTGAGTAATATCA
AGCTAAGGAAACAAAAGTAAAACGTGGTTGCTCTAAACTGTTTCTCTGTTCCTTTCTAAT
TGATATGAATGATAAATTTTTTAGATATATTTGTAGATGAAATGGGAATGATCTGTGATG
GAAAATGGAAATCTTATTGAAACATGCTAAAATCAATCGACATTGATGTCGATGTTAGCA
GTTTTCAAAGAATGTTAATGATTTTATGTACTGTATGTACTTTGAAAAGAATGATGTTCT
GTGATGGTTAGAGTAAGTGATTTCAAATATGTGTAATCTGTTTTGAAACAATTTTTCTTA
TAATATCTGGTGTTGGTTAGCAGTACCTTATTAGTGGTTTAGTAACATATTAATACATAT
TTACATTTTAAACTTTGCATATTATGAGGAGGACCATTCATTGTGGCGTACTACAGGAGA
CGCCTACATCCAGCAGTGGAAAAATACAGCCTGATGATGATACTATTAAGAAAAAAATAT
TAATGTTGAAATTATTTTCTATCTTCTGTGGGGATGGATATCTGGGCGACTACAATTTTC
TCAATAGTTTCGAATTGATTGATGAGTTTGTCTTTTGTTTTTTAAGATAAAAAAATTAAG
AGCGCGGAAACACATTACACTTAAAGCTATAATCATGAACTGAAAATATTACCAATATTA
GTGTTTTAATATCCACATGTTGAGGTCATATACAAAGTGGGATTAGAAAATCGGCATGTG
CTTTAATTACCATACAAGATTGTTGAGCTCTGTGTATTCCATTCCATTTGCCGTAATTCT
TCACATATCAAACACTTTTTTTTTTTTTTTTTTTTTTTT
(3459 bp)

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