SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25161_g1_i2
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		H(+)/Cl(-)_exchange_transporter_5_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005247 F voltage-gated chloride channel activity
GO:0005254 F chloride channel activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006821 P chloride transport
GO:0008021 C synaptic vesicle
GO:0012506 C vesicle membrane
GO:0015297 F antiporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0030165 F PDZ domain binding
GO:0030658 C transport vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031901 C early endosome membrane
GO:0031902 C late endosome membrane
GO:0034220 P ion transmembrane transport
GO:0034765 P regulation of ion transmembrane transport
GO:0045202 C synapse
GO:0055085 P transmembrane transport
GO:0060077 C inhibitory synapse
GO:1902476 P chloride transmembrane transport
GO:1903959 P regulation of anion transmembrane transport
Transcript
Level		FPKM:2.74 TPM:1.42
ORF EntryO_BomoMSG15514_3prime_partial:A_BomoMSG_c25161_g1_i2
Sequence
(Nucleotide)
GTGTTTAGTTTTGTATTTTTAAAATTTTTTAAAACTATGACCGTGGCTTTTAATACTAAT
TTAAAGTAATAAAAAAATGTTTTAAATAAATCTAAGTTACACAAGCATGGAGAGGTTTCC
TTTGAAGTCGTCAGTAACAAAAACAGGAATGACTTATCAATCAGTTTACAAAAAGGGCGC
AAACACAGCGAATGGGCGTGGTGCTCATAGCGGTGAGGATGAAATGGTAGATATCACGCC
GGGCCTCCAGCAAGCGGCGGACGGCGTCACCACACCCACAAGCCACGGAACCTTCCAGAT
CTACGAACAAGGAAGCCGAAATTCCGCGAGCAGCACTCATTGGGACACAATTATGTTCTC
AGGAATGCAAGGTGATGATGATATTCCTGGAATTGGACAATATGAAGATTTCCATACTAT
TGATTGGCAAAGAGATATTGCGAGAGATCGCATGCGACATAGATATATTGTGAAGAAGAG
GCAGGACTCAATATGGGATTTAATCAAAGGTGCCCATGATGCCTGGTCTGGATGGGTTTG
TGTATTGCTTGTGGGAGTAGCAACTGGGATAGTGGCAGGAGTAATTGACATTGGTGCCTC
ATGGATGACAGATCTCAAATTTGGAATTTGTCCAGCTGCATTTTGGTTTAATCGAGAACA
ATGCTGCTGGTCAGACACAAATACTACATTCGACAGTGGGAATTGCTCACAGTGGCTCAC
CTGGCCTCAAGTTTTTGGCGACCGAGGTGATGGTGCTGGAGCTTACATCATCAGTTATCT
CTTTTATATATTATGGGCTTTGATATTCGCTGCACTTTCAGCGTCGCTCGTAAGAATGTT
CGCGCCCTATGCATGTGGCTCTGGTATCCCCGAAATTAAGACCATACTAAGTGGTTTCAT
TATCCGAGGCTACCTCGGCAAGTGGACCCTTATCATCAAAGTGGTAGGACTCATACTGTC
TGTGTCATCGGGACTGTCTTTGGGGAAGGAAGGACCTATGGTGCACATTGCCAGCTGCCT
TGGTAACATTCTATCATACCTGTTTCCGAAATACGGTCGCAACGAGGCCAAGAAGCGCGA
GATCCTGTCCGC
(1092 bp)

- SilkBase 1999-2023 -