SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25116_g1_i4
Scaffold_idBomo_Chr2
NCBI non-redundant
(nr)		ATP-dependent_zinc_metalloprotease_YME1_homolog_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0004176 F ATP-dependent peptidase activity
GO:0004222 F metalloendopeptidase activity
GO:0005524 F ATP binding
GO:0005743 C mitochondrial inner membrane
GO:0006508 P proteolysis
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0007005 P mitochondrion organization
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:10.77 TPM:5.60
ORF EntryO_BomoMSG15359_complete:A_BomoMSG_c25116_g1_i4
Sequence
(Nucleotide)
CGTACCTACCTCCCAAGAAATTGACAAAATTTTCGAGTGCACTTCAAAAAAACTACAAAA
ACATACAATCTAGCTTCATGTAACATGTTCTCATTGAATTCTATAAACACCCAAAATCAG
ATATTAATCAGTTTTAGTCAATTATCGTGTCGATACGGCAACCTTTTCAAACACAGAAAG
CAAAATAGCTTAAAAGACAAACATGTGAAGGGGAAAGAAAGCGCCAGTGCTGCATGCGAG
ACTCAAGTTTGCCGCGAGAGCTTAGAAGAGTGTTTGAAGAATTTCGATAAGAATGTACTA
GCGGAGATGCGAAGTGTCGACCTCCGATCGTTGGCCACGATCGCCGCGTCGTCTAGAAGG
TCGCTCAACGATTTTGGCGGTGTTACATCTTGTAGAAAAGTGTCTTACACTTCAAGTGAA
TCTTTTGAGAAAAACAGGAATGGTTGGAGTGATACTCCTAGTGTTACAGTGGAGTTACGA
GGGAAAAACACACGATTTAACCTCTCCGATAACTTTATTCGCCTATTATGTCAAAACACA
AAAAGTACATTCAAGTACAACATTCAAGTAAGAGGATTTAAGACGGATCGAAGCATCAGT
GCAGATCTGAAAAGAAATCCGAACCTGGTTAATAGACTACGTAAGTTATTGGGGTTGGCT
GCAACGAGTTCAACAGAGAAGCACCCTCCGCTCAACCCTGAAGTTGCACCTCGATTGGAC
AAACTACTTAACGATGACGCGAACCATCTCACTCACCAGCAGAAGGACAAGATCAAGATT
GCGTTCGCTGAAGGCTATTTAGCGGGGTCCCATCCCGAGAATGTACGCGGTACGAAAGCC
TCCAAGTACCTGAAGCTGGTCCAGCAACTCCTCACCATAGTTCTCTTTCTTGCAATCTTT
GTGAGTTTGATGGCGTCGGTCAGCGGAACTGTCTTCCGGATCCAGCTCGGGAACCAGGTG
GAGGTGGACCCCGAAGATATCTCCGTTACCTTCGACGATGTCAAAGGCGCTGACGAAGCT
AAACAAGAACTGCAGGAAGTGGTGGAATTCCTCAAGTCCCCCGAGAAGTTTTCAACACTG
GGTGGTAAACTACCCAAGGGCGTGCTGCTCGTGGGCCCCCCCGGCACCGGCAAGACGCTA
CTGGCGCGGGCGGTGGCCGGCGAGGCTCGGGTACCGTTCTTCCATGCGGCGGGACCGGAG
TTCGACGAGATCCTGGTGGGACAGGGGGCTCGCAGAGTCCGGGACTTGTTCAAGGCGGCC
AAGGAGCGAGCGCCCTGCGTCATCTTCATAGACGAGATAGACTCGGTGGGAGCCAAGCGC
ACCAACAGCGTGCTGCACCCCTACGCCAACCAGACGATAAACCAGCTCCTATCAGAGATG
GACGGTTTCCATCAGAACGAAGGCGTGATCGTTCTGGGCGCCACCAACAGGAGGGATGAC
TTAGACCAGGCCTTGCTCAGGCCAGGACGATTTGATGTTGAGGTGACGGTGCCGCTGCCG
GACTACGTGGGGCGCGTGGAGCTGGCGCGGCTGTACGTGTCGCGCGTGCGGGCGCACCCC
GACGTGCAGCCCGAGGAGCTGGCGCGCGCCACCACCGGCTTCACCGGCGCCGACCTCGAG
AACATGGTCAACCAGGCCGCGCTCAGGGCAGCTATAGAGGGCGCCAAGACGGTCACCATG
AAGCACCTGGAGGATGCCCGCGACAAGGTGCTGATGGGTCCCGAGCGCCGGGGGCGGCTC
CCGGACGAGGAGGCCAACACCATCACCGCCTACCACGAGGGGGGCCATGCTGTTGTCGCT
TATTTTACTAAGGACGCCCATCCGCTGCACAAAGTGACCATCATCCCGCGCGGCCCGTCG
CTGGGCCACACCGCCTACATACCCGCCAAGGAGAGGTACCACGAGACGAAGCAGCAGCTC
CTAGCGATGATGGACACCATGATGGGGGGGCGGGCGGCGGAAGAACTCATCTTTGGACCG
GAGAAGATCACCTCAGGGGCGGCGTCGGACCTGAAGCAGGCGACGTCGCTGGCGCGGCAC
ATGGTGCGGGAGTGGGGCATGTCGGAGCGCGTGGGCCCGCGGGCGCTGGACCCGCCGGCG
GC
(2102 bp)

- SilkBase 1999-2023 -