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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25101_g1_i1
Scaffold_idBomo_Chr26
NCBI non-redundant
(nr)		negative_elongation_factor_A_isoform_X1_[Bombyx_mori]
Ontology
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0032021 C NELF complex
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051571 P positive regulation of histone H3-K4 methylation
Transcript
Level		FPKM:8.37 TPM:4.36
ORF EntryO_BomoMSG15330_5prime_partial:A_BomoMSG_c25101_g1_i1
Sequence
(Nucleotide)
CGCGCCCCGCACTCCTGCACGACGGACCCCCGCCTCTCGCCAGCCCCATACTCGTACAGG
GTCCTTCTGGTGGCAAGTTGGTGCTAGCAAGCGGTGGGAAGCCGGTTCTGGTGCCGGCAC
TGCTTAACTCCTCAGCCGTGTTACTGCAGCCTGGTGGAAAAGCTGTGTTACTGCATAATA
TTAAACAGGTCACCCAGCCCGTGGTCCAGCAACAACAGCGGACAACTGTTCCCGTACCAG
CCTTACATCAGACGCAGACTTTACATCATCAAATACCACAGACGCAGGTGCAGATTCAAC
AGCAAGTACAGCAGCCCACTCCCGTGCAGCCGGCGCCCCAACCAGCCGCCACGCCTCTAC
TGCCCAGACGAGGACTTTCCCTTACGCGAGAACAGATGCTGGAAGCCCAGGATATGTTCA
GAAATGCAAATCGTGTTACGAGACCGGAAAAAGCTCTTATACTTGGTTTTATGGCTGGAT
CTAGAGATAATCCGTGTCCGAACCTCGGCAATATTGTTACGATAAAACTCTCTGAAAACA
TTGAGAATGTTCTACAGTCGGACGACACGTATCTCACTATGCTCTCAGAGATGCATTTCC
AAATGAACTACAACAATGGACAGTGGACTAGACTCAAGAAGTACCGACCTATAGACGGCA
TGGTGCCGCAGAAGATACCTCCAGGATCCACTGTGATATCAGCCGGGAATCAGCAACCTG
TAGTTTCAATAGCCAACCAAACGATTAGCTAATGTGCTTCAGTGATAAATGACTTTGACA
TTATCAAGTGCTCTCAACTAAAGTGTTGAAATGTGTTTAATGTGCTTGTGGCCCCAGTAT
CATGCGTGACAGGTTCGAGACTGGCCACTTACTGTGCTATTTCAATTTTACTGAATGTGA
CGTGAAATTATATCGGTAGGTATGCATAATATTATTGATGTGAGACAATACAATCAGAAC
TGATGCAAATTCTAAAGTAATTTATGAAAATTATTACACTGTGCGGTATCAAAAGTAGCA
AATGTAAGTACAGAATATAAGAAGTTTTTAACTGTTCTTTATACAACCCCC
(1071 bp)

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