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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMSG_c25087_g1_i3
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		CCR4-NOT_transcription_complex_subunit_11_[Bombyx_mori]
Ontology
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0006977 P DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0008283 P cell population proliferation
GO:0030014 C CCR4-NOT complex
GO:0031047 P gene silencing by RNA
Transcript
Level		FPKM:3.40 TPM:1.77
ORF EntryO_BomoMSG15262_complete:A_BomoMSG_c25087_g1_i3
Sequence
(Nucleotide)
TTTGTGTTTCGTCTAAGCGTATAAATTTATTTGATAAGTATTAGTTAAATAAATAAAATG
TCTCAACATCTGATTAATGAAAACAGTAAATACATACTCGATTTATTTTCCGAACAGACA
GTCGATTCGCAGGGCTTAGATTCAATATGTGTTCAAGTTCAAAAAAAGTTCCCGAAGACC
GATCATTTTAATCTAAGTCTGCTCCTGCCATCGCTGATTACGGGCGGAGATCTTTCACTC
CCTGGGCAGCGTGTTGTTGCACTGGCTCTTCTATATGACTTCTACAAGGGAGAAAACCCA
TTCAGCCCATTGTTCTTGCATCTCCTAGAAGGGAAGCTGGGTCTTCTGCCTCTAGCTCCA
CAGGAGAGACTGTTTATAGGACAGCTGCATGGATTCTTGCCTGTAAACATTAAAGATGTT
ATGAAAAAATCAGCAAAACAAGTAATGATGACAGAAGTATCTCCTAAGGACCTGGAGTTT
GATTACTCACCGCTGCAGGCGATTGTGGCCGAACGTTTGACTGACACCAGTGCTGTGGCC
CGGGCCACTTGTTCTGCATTGATACCGCTTAGTGATGGGAGTCCACCGAACCGCCTTGCC
TTGAAAGAACTGCTAGAAGCCTTGATGAGTAATGAGTATCTCCCGCTGCACCGAACGCTA
TCGGCCGCCGGACCCATCCCACCGCCCACGTTCCTCATCGACACCAATGATGTGCCTTTT
GCTGACGAGGGCGTTTGGAAGAACTTAATAAATCGCGGCACGTATATACCGATGTATGAC
TCCGACTACGACGGACTGATCGGGCTCCGACCTGAGAAGATCGATAGAAGATCGCAGCCT
AACCAACAGCACAAAGTCAAGGAGGAAAAAAAAGAGAAACAAGAAGAGAAGAAGGAAGAT
AAAGATCCTGTGTCATTAGTGAGTGAAGCTAAAGATTTGACCCAGATCGCGCTCAGGGGA
GCCCTCAGTGTACAGCAACAGCAAAGACTACTGGCACTGCTGGATCAGGAACCTAACATT
GTCTACGAAATAGGTGTTACACCTAACCAGCTACCGGACCTAGTCGAGAACAATCCAATG
GTCGCCATATCGGTGCTTCTCAAACTGATCCACTCTCAGCACATCACGGAGTACTTCAGT
GTCCTCGTCAACATGGAAATGTCGCTGCACTCCATGGAGGTGGTCAACAGGTTAACGACC
TCAGTGGATTTGCCGGTGGAGTTCGTTCACCTCTACATAAGCAATTGTATTTCGACGTGT
GAGACAATACGGGACAGATACATGCAAAACAGGCTCGTACGATTGGTGTGTGTCTTCCTG
CAGTCGCTGATAAGGAACAAGATCATCAATGTGAAGGAGCTATTCATAGAAGTGGAAGCG
TTCTGCGTTGAGTTCAGCCGGATCCGAGAGGCCGCTGCGCTGTTTCGGCTCCTGAAGCAG
CTGGACTCCGGCGAGGCTGCCCACAAGGACCCCAAGGATAACTAGCGACGGCACAAGAGC
AGGGTTTACTCGAACACGAATAGGTAGCGCCGGCCTCACGTCTGGGACCCCAGCCAATCG
GAGAGCTAACAGCTGACCGCACCGCTGTGACATTGAAACTATAACAGTTCCACCGGTGAT
TACAATTGTGATGTGGCGTGTTAAACGTTCAATAGTTTTGTGGATTAATTGTGTAATAAG
CAATTGGAAACTTGTACACTCTAAGACCTATTTTCTAAATTTGTGAAACTCGTGATATCT
CGGGTATAAGACATTAGCCGGCAGCTGTGACAGCTAGTTTTGAACCTAACAACTATTATA
GCATCAACGAAATAATGTCCACTCTCACACAAAAAGGTAATGCAGGCTCTATCAGGACCT
ACGTCTGTGAACATAACCGATACAATGTTTAGTGCGTATAAAGTTATGGTAAATATCGAG
TGTCTGTGAAAATTGTGATAGTAATAATAATAAAGTATTGATTGAAATAATCAGATTAGA
ATACATACATTATCCAGATATGCCGGAC
(2008 bp)

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